Gene annotation
Transcriptome id Sobic.009G123400.1
Synonym
Functional annotation -
UniProt A0A1B6P821
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
2 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
3 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
4 Sobic.005G215601 - -
5 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
6 Sobic.004G210700 ATOZI1, putative, expressed -
7 Sobic.007G066900 Cupin domain containing protein, expressed -
8 Sobic.004G088300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBK4 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.006G230600 expressed protein -
10 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
11 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
12 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
13 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
14 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
17 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
18 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
19 Sobic.005G086400 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
20 Sobic.002G261200 expressed protein -


Gene co-expression network
sample Sobic009G123400 Sobic009G123400 Sobic004G340200 Sobic004G340200 Sobic009G123400--Sobic004G340200 Sobic010G032000 Sobic010G032000 Sobic009G123400--Sobic010G032000 Sobic010G031100 Sobic010G031100 Sobic009G123400--Sobic010G031100 Sobic005G215601 Sobic005G215601 Sobic009G123400--Sobic005G215601 Sobic010G031900 Sobic010G031900 Sobic009G123400--Sobic010G031900 Sobic004G210700 Sobic004G210700 Sobic009G123400--Sobic004G210700 Sobic007G066900 Sobic007G066900 Sobic009G123400--Sobic007G066900 Sobic004G088300 Sobic004G088300 Sobic009G123400--Sobic004G088300 Sobic006G230600 Sobic006G230600 Sobic009G123400--Sobic006G230600 Sobic004G340200--Sobic009G123400 Sobic004G340200--Sobic010G032000 Sobic004G340200--Sobic004G210700 Sobic004G340200--Sobic007G066900 Sobic004G340200--Sobic010G031100 Sobic004G140850 Sobic004G140850 Sobic004G340200--Sobic004G140850 Sobic004G340200--Sobic005G215601 Sobic010G032000--Sobic005G215601 Sobic010G032000--Sobic004G340200 Sobic010G032000--Sobic009G123400 Sobic010G032000--Sobic007G066900 Sobic001G129700 Sobic001G129700 Sobic010G032000--Sobic001G129700 Sobic010G032000--Sobic004G210700 Sobic010G032000--Sobic004G140850 Sobic010G032100 Sobic010G032100 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic005G215601--Sobic010G032000 Sobic005G215601--Sobic004G340200 Sobic005G215601--Sobic009G123400 Sobic005G215601--Sobic010G031100 Sobic005G215601--Sobic001G129700 Sobic005G215601--Sobic004G210700 Sobic001G354200 Sobic001G354200 Sobic005G215601--Sobic001G354200 Sobic005G215601--Sobic007G066900 Sobic005G215601--Sobic006G032700 Sobic010G031900--Sobic009G123400 Sobic010G031900--Sobic004G340200 Sobic007G214400 Sobic007G214400 Sobic010G031900--Sobic007G214400 Sobic010G031900--Sobic006G032700 Sobic010G031900--Sobic010G031100 Sobic010G031900--Sobic001G149800 Sobic002G389000 Sobic002G389000 Sobic010G031900--Sobic002G389000 Sobic001G107800 Sobic001G107800 Sobic010G031900--Sobic001G107800 Sobic010G031900--Sobic001G254100 Sobic004G210700--Sobic004G340200 Sobic004G210700--Sobic007G066900 Sobic004G210700--Sobic009G123400 Sobic007G067608 Sobic007G067608 Sobic004G210700--Sobic007G067608 Sobic004G210700--Sobic010G031100 Sobic004G210700--Sobic010G032000 Sobic004G210700--Sobic005G215601 Sobic004G210700--Sobic004G140850 Sobic007G066900--Sobic007G067608 Sobic007G066900--Sobic010G032000 Sobic007G066900--Sobic004G210700 Sobic007G066900--Sobic004G340200 Sobic007G066900--Sobic004G140850 Sobic007G066900--Sobic009G123400 Sobic007G066500 Sobic007G066500 Sobic007G066900--Sobic007G066500 Sobic004G088300--Sobic002G389000 Sobic001G076100 Sobic001G076100 Sobic004G088300--Sobic001G076100 Sobic004G088300--Sobic006G230600 Sobic004G088300--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic004G088300--Sobic001G371800 Sobic004G088300--Sobic001G107800 Sobic004G088300--Sobic006G230800 Sobic004G088300--Sobic010G031100 Sobic001G443800 Sobic001G443800 Sobic004G088300--Sobic001G443800 Sobic006G230600--Sobic002G389000 Sobic006G230600--Sobic001G371800 Sobic006G230600--Sobic001G107800 Sobic006G230600--Sobic001G076100 Sobic006G230600--Sobic007G214400 Sobic003G394400 Sobic003G394400 Sobic006G230600--Sobic003G394400 Sobic006G230600--Sobic004G088300 Sobic006G230600--Sobic006G230800 Sobic006G230600--Sobic010G031100
Octagon: transcription factors


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