Gene annotation
Transcriptome id Sobic.001G129700.1
Synonym GLP4, Sb01g011370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Cupin domain containing protein, expressed
UniProt C5WNY4
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18970 : germin-like protein 4
RAP-DB (Rice) LOC_Os03g48770.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039119 , Zm00025a007679 , Zm00025a007678 , Zm00025a007677
Brachypodium KQK13699 , KQK13700
Barley HORVU4Hr1G005540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
2 Sobic.005G215601 - -
3 Sobic.009G123400 - -
4 Sobic.001G436800 expressed protein -
5 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
6 Sobic.007G066900 Cupin domain containing protein, expressed -
7 Sobic.004G210700 ATOZI1, putative, expressed -
8 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
9 Sobic.001G354200 O-methyltransferase, putative, expressed -
10 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
11 Sobic.002G090600 OsFBX397 - F-box domain containing protein, expressed -
12 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
13 Sobic.010G102500 expressed protein -
14 Sobic.003G060200 expressed protein -
15 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
16 Sobic.002G215300 expressed protein -
17 Sobic.003G138300 expressed protein -
18 Sobic.004G245600 expressed protein -
19 Sobic.008G149900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -


Gene co-expression network
sample Sobic001G129700 Sobic001G129700 Sobic010G032000 Sobic010G032000 Sobic001G129700--Sobic010G032000 Sobic005G215601 Sobic005G215601 Sobic001G129700--Sobic005G215601 Sobic009G123400 Sobic009G123400 Sobic001G129700--Sobic009G123400 Sobic001G436800 Sobic001G436800 Sobic001G129700--Sobic001G436800 Sobic004G340200 Sobic004G340200 Sobic001G129700--Sobic004G340200 Sobic007G066900 Sobic007G066900 Sobic001G129700--Sobic007G066900 Sobic004G210700 Sobic004G210700 Sobic001G129700--Sobic004G210700 Sobic010G031900 Sobic010G031900 Sobic001G129700--Sobic010G031900 Sobic001G354200 Sobic001G354200 Sobic001G129700--Sobic001G354200 Sobic010G032000--Sobic005G215601 Sobic010G032000--Sobic004G340200 Sobic010G032000--Sobic009G123400 Sobic010G032000--Sobic007G066900 Sobic010G032000--Sobic001G129700 Sobic010G032000--Sobic004G210700 Sobic004G140850 Sobic004G140850 Sobic010G032000--Sobic004G140850 Sobic005G215601--Sobic010G032000 Sobic005G215601--Sobic004G340200 Sobic005G215601--Sobic009G123400 Sobic010G031100 Sobic010G031100 Sobic005G215601--Sobic010G031100 Sobic005G215601--Sobic001G129700 Sobic005G215601--Sobic004G210700 Sobic005G215601--Sobic001G354200 Sobic005G215601--Sobic007G066900 Sobic006G032700 Sobic006G032700 Sobic005G215601--Sobic006G032700 Sobic009G123400--Sobic004G340200 Sobic009G123400--Sobic010G032000 Sobic009G123400--Sobic010G031100 Sobic009G123400--Sobic005G215601 Sobic009G123400--Sobic010G031900 Sobic009G123400--Sobic004G210700 Sobic009G123400--Sobic007G066900 Sobic004G088300 Sobic004G088300 Sobic009G123400--Sobic004G088300 Sobic006G230600 Sobic006G230600 Sobic009G123400--Sobic006G230600 Sobic001G436800--Sobic010G031100 Sobic002G090600 Sobic002G090600 Sobic001G436800--Sobic002G090600 Sobic001G436800--Sobic005G215601 Sobic001G436800--Sobic004G210700 Sobic006G230800 Sobic006G230800 Sobic001G436800--Sobic006G230800 Sobic003G327500 Sobic003G327500 Sobic001G436800--Sobic003G327500 Sobic001G436800--Sobic010G032000 Sobic001G436800--Sobic001G129700 Sobic001G436800--Sobic006G032700 Sobic004G340200--Sobic009G123400 Sobic004G340200--Sobic010G032000 Sobic004G340200--Sobic004G210700 Sobic004G340200--Sobic007G066900 Sobic004G340200--Sobic010G031100 Sobic004G340200--Sobic004G140850 Sobic004G340200--Sobic005G215601 Sobic007G067608 Sobic007G067608 Sobic007G066900--Sobic007G067608 Sobic007G066900--Sobic010G032000 Sobic007G066900--Sobic004G210700 Sobic007G066900--Sobic004G340200 Sobic007G066900--Sobic004G140850 Sobic007G066900--Sobic009G123400 Sobic007G066500 Sobic007G066500 Sobic007G066900--Sobic007G066500 Sobic004G210700--Sobic004G340200 Sobic004G210700--Sobic007G066900 Sobic004G210700--Sobic009G123400 Sobic004G210700--Sobic007G067608 Sobic004G210700--Sobic010G031100 Sobic004G210700--Sobic010G032000 Sobic004G210700--Sobic005G215601 Sobic004G210700--Sobic004G140850 Sobic010G031900--Sobic009G123400 Sobic010G031900--Sobic004G340200 Sobic007G214400 Sobic007G214400 Sobic010G031900--Sobic007G214400 Sobic010G031900--Sobic006G032700 Sobic010G031900--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic010G031900--Sobic001G149800 Sobic002G389000 Sobic002G389000 Sobic010G031900--Sobic002G389000 Sobic001G107800 Sobic001G107800 Sobic010G031900--Sobic001G107800 Sobic001G254100 Sobic001G254100 Sobic010G031900--Sobic001G254100 Sobic001G354200--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic010G032100 Sobic010G032100 Sobic001G354200--Sobic010G032100 Sobic003G138300 Sobic003G138300 Sobic001G354200--Sobic003G138300 Sobic001G481500 Sobic001G481500 Sobic001G354200--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic009G229000 Sobic009G229000 Sobic001G354200--Sobic009G229000
Octagon: transcription factors


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