Gene annotation
Transcriptome id Sobic.008G149900.1
Synonym Sb08g019960
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YQX9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g40180.1 : expressed protein
MaizeGDB (Corn) Zm00025a004499
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G149900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
2 Sobic.004G140850 - -
3 Sobic.004G140850 - -
4 Sobic.004G140850 - -
5 Sobic.005G215601 - -
6 Sobic.004G210700 ATOZI1, putative, expressed -
7 Sobic.007G066900 Cupin domain containing protein, expressed -
8 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
9 Sobic.009G123400 - -
10 Sobic.002G379201 - -
11 Sobic.004G088300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBK4 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.007G067608 - -
13 Sobic.002G090600 OsFBX397 - F-box domain containing protein, expressed -
14 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
15 Sobic.002G315900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
16 Sobic.004G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
17 Sobic.001G436800 expressed protein -
18 Sobic.008G036200 expressed protein -
19 Sobic.001G129700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -


Gene co-expression network
sample Sobic008G149900 Sobic008G149900 Sobic004G340200 Sobic004G340200 Sobic008G149900--Sobic004G340200 Sobic004G140850 Sobic004G140850 Sobic008G149900--Sobic004G140850 Sobic005G215601 Sobic005G215601 Sobic008G149900--Sobic005G215601 Sobic004G210700 Sobic004G210700 Sobic008G149900--Sobic004G210700 Sobic007G066900 Sobic007G066900 Sobic008G149900--Sobic007G066900 Sobic010G032000 Sobic010G032000 Sobic008G149900--Sobic010G032000 Sobic009G123400 Sobic009G123400 Sobic008G149900--Sobic009G123400 Sobic004G340200--Sobic009G123400 Sobic004G340200--Sobic010G032000 Sobic004G340200--Sobic004G210700 Sobic004G340200--Sobic007G066900 Sobic010G031100 Sobic010G031100 Sobic004G340200--Sobic010G031100 Sobic004G340200--Sobic004G140850 Sobic004G340200--Sobic005G215601 Sobic004G140850--Sobic004G140850 Sobic004G140850--Sobic007G066900 Sobic002G379201 Sobic002G379201 Sobic004G140850--Sobic002G379201 Sobic004G140850--Sobic004G340200 Sobic002G315900 Sobic002G315900 Sobic004G140850--Sobic002G315900 Sobic007G067608 Sobic007G067608 Sobic004G140850--Sobic007G067608 Sobic004G140850--Sobic004G210700 Sobic004G140850--Sobic008G149900 Sobic005G215601--Sobic010G032000 Sobic005G215601--Sobic004G340200 Sobic005G215601--Sobic009G123400 Sobic005G215601--Sobic010G031100 Sobic001G129700 Sobic001G129700 Sobic005G215601--Sobic001G129700 Sobic005G215601--Sobic004G210700 Sobic001G354200 Sobic001G354200 Sobic005G215601--Sobic001G354200 Sobic005G215601--Sobic007G066900 Sobic006G032700 Sobic006G032700 Sobic005G215601--Sobic006G032700 Sobic004G210700--Sobic004G340200 Sobic004G210700--Sobic007G066900 Sobic004G210700--Sobic009G123400 Sobic004G210700--Sobic007G067608 Sobic004G210700--Sobic010G031100 Sobic004G210700--Sobic010G032000 Sobic004G210700--Sobic005G215601 Sobic004G210700--Sobic004G140850 Sobic007G066900--Sobic007G067608 Sobic007G066900--Sobic010G032000 Sobic007G066900--Sobic004G210700 Sobic007G066900--Sobic004G340200 Sobic007G066900--Sobic004G140850 Sobic007G066900--Sobic009G123400 Sobic007G066500 Sobic007G066500 Sobic007G066900--Sobic007G066500 Sobic010G032000--Sobic005G215601 Sobic010G032000--Sobic004G340200 Sobic010G032000--Sobic009G123400 Sobic010G032000--Sobic007G066900 Sobic010G032000--Sobic001G129700 Sobic010G032000--Sobic004G210700 Sobic010G032000--Sobic004G140850 Sobic009G123400--Sobic004G340200 Sobic009G123400--Sobic010G032000 Sobic009G123400--Sobic010G031100 Sobic009G123400--Sobic005G215601 Sobic010G031900 Sobic010G031900 Sobic009G123400--Sobic010G031900 Sobic009G123400--Sobic004G210700 Sobic009G123400--Sobic007G066900 Sobic004G088300 Sobic004G088300 Sobic009G123400--Sobic004G088300 Sobic006G230600 Sobic006G230600 Sobic009G123400--Sobic006G230600
Octagon: transcription factors


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