Gene annotation
Transcriptome id Sobic.002G090600.1
Synonym Sb02g007510
Functional annotation OsFBX397 - F-box domain containing protein, expressed
UniProt A0A1B6QA20
Pfam -
Panther DB PTHR32133 PTHR32133:SF137
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g15160.1 : OsFBX40 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5D02G425700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G436800 expressed protein -
2 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
3 Sobic.005G215601 - -
4 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
5 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
6 Sobic.009G123400 - -
7 Sobic.004G210700 ATOZI1, putative, expressed -
8 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
9 Sobic.003G327500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
10 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
11 Sobic.004G088300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBK4 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.002G261200 expressed protein -
13 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
14 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
15 Sobic.002G215300 expressed protein -
16 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
17 Sobic.003G138300 expressed protein -
18 Sobic.006G230600 expressed protein -
19 Sobic.008G149900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G129700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic002G090600 Sobic002G090600 Sobic001G436800 Sobic001G436800 Sobic002G090600--Sobic001G436800 Sobic010G031100 Sobic010G031100 Sobic002G090600--Sobic010G031100 Sobic005G215601 Sobic005G215601 Sobic002G090600--Sobic005G215601 Sobic004G340200 Sobic004G340200 Sobic002G090600--Sobic004G340200 Sobic006G230800 Sobic006G230800 Sobic002G090600--Sobic006G230800 Sobic009G123400 Sobic009G123400 Sobic002G090600--Sobic009G123400 Sobic004G210700 Sobic004G210700 Sobic002G090600--Sobic004G210700 Sobic010G032000 Sobic010G032000 Sobic002G090600--Sobic010G032000 Sobic003G327500 Sobic003G327500 Sobic002G090600--Sobic003G327500 Sobic001G436800--Sobic010G031100 Sobic001G436800--Sobic002G090600 Sobic001G436800--Sobic005G215601 Sobic001G436800--Sobic004G210700 Sobic001G436800--Sobic006G230800 Sobic001G436800--Sobic003G327500 Sobic001G436800--Sobic010G032000 Sobic001G129700 Sobic001G129700 Sobic001G436800--Sobic001G129700 Sobic006G032700 Sobic006G032700 Sobic001G436800--Sobic006G032700 Sobic010G032100 Sobic010G032100 Sobic010G031100--Sobic010G032100 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic005G215601--Sobic010G032000 Sobic005G215601--Sobic004G340200 Sobic005G215601--Sobic009G123400 Sobic005G215601--Sobic010G031100 Sobic005G215601--Sobic001G129700 Sobic005G215601--Sobic004G210700 Sobic001G354200 Sobic001G354200 Sobic005G215601--Sobic001G354200 Sobic007G066900 Sobic007G066900 Sobic005G215601--Sobic007G066900 Sobic005G215601--Sobic006G032700 Sobic004G340200--Sobic009G123400 Sobic004G340200--Sobic010G032000 Sobic004G340200--Sobic004G210700 Sobic004G340200--Sobic007G066900 Sobic004G340200--Sobic010G031100 Sobic004G140850 Sobic004G140850 Sobic004G340200--Sobic004G140850 Sobic004G340200--Sobic005G215601 Sobic006G190500 Sobic006G190500 Sobic006G230800--Sobic006G190500 Sobic003G123600 Sobic003G123600 Sobic006G230800--Sobic003G123600 Sobic006G230800--Sobic010G031100 Sobic001G107800 Sobic001G107800 Sobic006G230800--Sobic001G107800 Sobic006G230800--Sobic002G261200 Sobic002G415600 Sobic002G415600 Sobic006G230800--Sobic002G415600 Sobic006G230800--Sobic006G230600 Sobic009G111200 Sobic009G111200 Sobic006G230800--Sobic009G111200 Sobic006G230800--Sobic010G032100 Sobic009G123400--Sobic004G340200 Sobic009G123400--Sobic010G032000 Sobic009G123400--Sobic010G031100 Sobic009G123400--Sobic005G215601 Sobic010G031900 Sobic010G031900 Sobic009G123400--Sobic010G031900 Sobic009G123400--Sobic004G210700 Sobic009G123400--Sobic007G066900 Sobic004G088300 Sobic004G088300 Sobic009G123400--Sobic004G088300 Sobic009G123400--Sobic006G230600 Sobic004G210700--Sobic004G340200 Sobic004G210700--Sobic007G066900 Sobic004G210700--Sobic009G123400 Sobic007G067608 Sobic007G067608 Sobic004G210700--Sobic007G067608 Sobic004G210700--Sobic010G031100 Sobic004G210700--Sobic010G032000 Sobic004G210700--Sobic005G215601 Sobic004G210700--Sobic004G140850 Sobic010G032000--Sobic005G215601 Sobic010G032000--Sobic004G340200 Sobic010G032000--Sobic009G123400 Sobic010G032000--Sobic007G066900 Sobic010G032000--Sobic001G129700 Sobic010G032000--Sobic004G210700 Sobic010G032000--Sobic004G140850 Sobic003G327500--Sobic006G230800 Sobic003G327500--Sobic010G031100 Sobic003G327500--Sobic006G190500 Sobic004G199300 Sobic004G199300 Sobic003G327500--Sobic004G199300 Sobic003G327500--Sobic001G436800 Sobic003G327500--Sobic001G107800 Sobic003G327500--Sobic003G123600 Sobic006G230700 Sobic006G230700 Sobic003G327500--Sobic006G230700 Sobic003G327500--Sobic002G415600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.