Gene annotation
Transcriptome id Sobic.004G278400.1
Synonym
Functional annotation DUF581 domain containing protein, expressed
UniProt A0A194YS23
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47060 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os04g49620.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032351
Brachypodium -
Barley -
Wheat TraesCS2B02G476900 , TraesCS2D02G455200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G364950 - -
2 Sobic.006G214600 - -
3 Sobic.004G292001 - -
4 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.004G352301 - -
7 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
8 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
9 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
10 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking
11 Sobic.010G156500 expressed protein -
12 Sobic.010G043900 expressed protein -
13 Sobic.003G026400 aquaporin protein, putative, expressed K09874: aquaporin NIP
14 Sobic.002G004900 transporter family protein, putative, expressed -
15 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
16 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
17 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
18 Sobic.009G036700 EGG APPARATUS-1, putative, expressed -
19 Sobic.005G196800 membrane protein, putative, expressed -
20 Sobic.002G422300 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3


Gene co-expression network
sample Sobic004G278400 Sobic004G278400 Sobic003G364950 Sobic003G364950 Sobic004G278400--Sobic003G364950 Sobic006G214600 Sobic006G214600 Sobic004G278400--Sobic006G214600 Sobic004G292001 Sobic004G292001 Sobic004G278400--Sobic004G292001 Sobic003G364000 Sobic003G364000 Sobic004G278400--Sobic003G364000 Sobic003G364300 Sobic003G364300 Sobic004G278400--Sobic003G364300 Sobic004G352301 Sobic004G352301 Sobic004G278400--Sobic004G352301 Sobic005G213500 Sobic005G213500 Sobic004G278400--Sobic005G213500 Sobic001G433900 Sobic001G433900 Sobic004G278400--Sobic001G433900 Sobic005G005600 Sobic005G005600 Sobic004G278400--Sobic005G005600 Sobic003G364950--Sobic006G214600 Sobic010G043900 Sobic010G043900 Sobic003G364950--Sobic010G043900 Sobic003G364950--Sobic004G292001 Sobic003G364950--Sobic004G278400 Sobic003G364950--Sobic005G213500 Sobic003G364950--Sobic003G364300 Sobic002G422300 Sobic002G422300 Sobic003G364950--Sobic002G422300 Sobic003G364950--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G364950--Sobic002G004900 Sobic006G214600--Sobic003G364950 Sobic006G214600--Sobic010G043900 Sobic006G214600--Sobic002G422300 Sobic006G214600--Sobic004G278400 Sobic006G190700 Sobic006G190700 Sobic006G214600--Sobic006G190700 Sobic001G054500 Sobic001G054500 Sobic006G214600--Sobic001G054500 Sobic005G108601 Sobic005G108601 Sobic006G214600--Sobic005G108601 Sobic004G045400 Sobic004G045400 Sobic006G214600--Sobic004G045400 Sobic006G227750 Sobic006G227750 Sobic006G214600--Sobic006G227750 Sobic007G065900 Sobic007G065900 Sobic004G292001--Sobic007G065900 Sobic007G065800 Sobic007G065800 Sobic004G292001--Sobic007G065800 Sobic002G130601 Sobic002G130601 Sobic004G292001--Sobic002G130601 Sobic004G292001--Sobic003G364950 Sobic008G157800 Sobic008G157800 Sobic004G292001--Sobic008G157800 Sobic004G292001--Sobic005G213500 Sobic004G292001--Sobic004G278400 Sobic004G023500 Sobic004G023500 Sobic004G292001--Sobic004G023500 Sobic007G030400 Sobic007G030400 Sobic004G292001--Sobic007G030400 Sobic010G088700 Sobic010G088700 Sobic003G364000--Sobic010G088700 Sobic009G217700 Sobic009G217700 Sobic003G364000--Sobic009G217700 Sobic010G156500 Sobic010G156500 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G280200 Sobic003G280200 Sobic003G364000--Sobic003G280200 Sobic010G259500 Sobic010G259500 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic002G034800 Sobic002G034800 Sobic003G364000--Sobic002G034800 Sobic003G382600 Sobic003G382600 Sobic003G364000--Sobic003G382600 Sobic003G364300--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic007G008100 Sobic007G008100 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic003G364300--Sobic001G054500 Sobic002G302500 Sobic002G302500 Sobic003G364300--Sobic002G302500 Sobic003G026400 Sobic003G026400 Sobic004G352301--Sobic003G026400 Sobic004G352301--Sobic004G278400 Sobic009G187200 Sobic009G187200 Sobic004G352301--Sobic009G187200 Sobic002G354100 Sobic002G354100 Sobic004G352301--Sobic002G354100 Sobic004G185100 Sobic004G185100 Sobic004G352301--Sobic004G185100 Sobic010G067400 Sobic010G067400 Sobic004G352301--Sobic010G067400 Sobic003G264600 Sobic003G264600 Sobic004G352301--Sobic003G264600 Sobic002G243000 Sobic002G243000 Sobic004G352301--Sobic002G243000 Sobic004G340900 Sobic004G340900 Sobic004G352301--Sobic004G340900 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic005G213500--Sobic003G364300 Sobic006G132900 Sobic006G132900 Sobic005G213500--Sobic006G132900 Sobic005G213500--Sobic002G338500 Sobic005G213500--Sobic010G043900 Sobic005G213500--Sobic010G259500 Sobic005G213500--Sobic005G005600 Sobic001G433900--Sobic006G132900 Sobic001G433900--Sobic010G259500 Sobic010G066700 Sobic010G066700 Sobic001G433900--Sobic010G066700 Sobic003G319700 Sobic003G319700 Sobic001G433900--Sobic003G319700 Sobic001G433900--Sobic010G088700 Sobic001G433900--Sobic002G034800 Sobic001G449600 Sobic001G449600 Sobic001G433900--Sobic001G449600 Sobic001G433900--Sobic003G364000 Sobic003G301600 Sobic003G301600 Sobic001G433900--Sobic003G301600 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic006G143400 Sobic006G143400 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G005600--Sobic005G213500 Sobic007G166000 Sobic007G166000 Sobic005G005600--Sobic007G166000 Sobic005G005600--Sobic003G364000 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700
Octagon: transcription factors


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