Gene annotation
| Transcriptome id | Sobic.003G026400.1 |
|---|---|
| Synonym | NIP1, NLM2, ATNLM2, Sb03g002490, 2 |
| Functional annotation | aquaporin protein, putative, expressed |
| UniProt | A0A1B6Q107 |
| Pfam | PF00230 |
| Panther DB | PTHR19139 PTHR19139:SF184 |
| NCBI CDD | KOG0223; Aquaporin (major intrinsic protein family) |
| KEGG Orthology | K09874; aquaporin NIP |
| Gene Ontology | GO:0016020; membrane GO:0006810transport GO:0005215transporter activity |
Orthologs (automatic annotation)
| TAIR | AT4G18910 : NOD26-like intrinsic protein 1;2 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g11560.1 : aquaporin protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043133 , Zm00025a020058 , Zm00025a023735 |
| Brachypodium | KQK07073 , KQJ94164 , KQK01944 |
| Barley | HORVU7Hr1G121250.5 , HORVU7Hr1G121250.6 , HORVU7Hr1G121250.2 , HORVU7Hr1G121250.3 , HORVU7Hr1G043590.6 , HORVU7Hr1G043590.7 , HORVU7Hr1G043590.4 , HORVU7Hr1G043590.5 , HORVU7Hr1G043590.2 , HORVU7Hr1G043590.3 , HORVU7Hr1G043590.1 , HORVU7Hr1G043590.8 , HORVU7Hr1G043600.2 , HORVU7Hr1G043600.3 , HORVU7Hr1G043600.1 , HORVU7Hr1G043600.6 , HORVU7Hr1G043600.7 , HORVU7Hr1G043600.4 , HORVU7Hr1G043600.5 |
| Wheat | TraesCS7A02G215700 , TraesCS3B02G156700 , TraesCS7A02G553000 , TraesCS7B02G122600 , TraesCS7B02G122600 , TraesCS3A02G139100 , TraesCS3A02G139100 , TraesCS3A02G139100 , TraesCS7B02G476700 , TraesCS7D02G539500 , TraesCS3D02G139400 , TraesCS7A02G355000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G114900 | - | - |
| 2 | Sobic.010G043900 | expressed protein | - |
| 3 | Sobic.002G338500 | sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed | - |
| 4 | Sobic.006G158400 | short-chain dehydrogenase/reductase, putative, expressed | K15095: (+)-neomenthol dehydrogenase |
| 5 | Sobic.006G008000 | O-methyltransferase, putative, expressed | - |
| 6 | Sobic.008G027600 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 7 | Sobic.010G082600 | EF hand family protein, putative, expressed | - |
| 8 | Sobic.006G141700 | OsGrx_C2.2 - glutaredoxin subgroup I, expressed | K03676: grxC, GLRX, glutaredoxin 3 |
| 9 | Sobic.003G264600 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 10 | Sobic.008G066200 | expressed protein | - |
| 11 | Sobic.010G210100 | "GW6(Ortholog in rice:Song et al., 2015)"(PubMedID : 31659936)@HLS, putative, expressed | - |
| 12 | Sobic.009G145700 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 13 | Sobic.003G043600 | BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed | - |
| 14 | Sobic.004G161751 | - | - |
| 15 | Sobic.009G145600 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 16 | Sobic.002G369400 | Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed | - |
| 17 | Sobic.002G422300 | ethylene-insensitive 3, putative, expressed | K14514: ethylene-insensitive protein 3 |
| 18 | Sobic.002G294000 | purine permease, putative, expressed | - |
| 19 | Sobic.004G045400 | 60S ribosomal protein L37a, putative, expressed | K02921: RP-L37Ae, large subunit ribosomal protein L37Ae |
| 20 | Sobic.009G187200 | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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