Gene annotation
Transcriptome id Sobic.003G417700.1
Synonym SbNF-YB7, Nuclear Factor Y, Sb03g045130, NF-YB5
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt A0A1W0W1A6
Pfam PF00808
Panther DB PTHR11064 PTHR11064:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47810 : nuclear factor Y, subunit B5
RAP-DB (Rice) LOC_Os01g70880.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a026115
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.003G156200 cytochrome P450, putative, expressed -
3 Sobic.004G148200 Cupin domain containing protein, expressed -
4 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
5 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
6 Sobic.003G280100 expressed protein -
7 Sobic.010G213700 GDU1, putative, expressed -
8 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
10 Sobic.003G382600 ARGOS, putative, expressed -
11 Sobic.009G139400 expressed protein -
12 Sobic.006G268800 transporter family protein, putative, expressed -
13 Sobic.007G061300 - -
14 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.001G187200 expressed protein -
16 Sobic.003G252800 hypothetical protein -
17 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
18 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.004G189400 expressed protein -
20 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G417700 Sobic003G417700 Sobic003G280200 Sobic003G280200 Sobic003G417700--Sobic003G280200 Sobic003G156200 Sobic003G156200 Sobic003G417700--Sobic003G156200 Sobic004G148200 Sobic004G148200 Sobic003G417700--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G417700--Sobic005G029200 Sobic009G128700 Sobic009G128700 Sobic003G417700--Sobic009G128700 Sobic003G280100 Sobic003G280100 Sobic003G417700--Sobic003G280100 Sobic010G213700 Sobic010G213700 Sobic003G417700--Sobic010G213700 Sobic003G426000 Sobic003G426000 Sobic003G417700--Sobic003G426000 Sobic008G158100 Sobic008G158100 Sobic003G417700--Sobic008G158100 Sobic003G280200--Sobic003G417700 Sobic002G415100 Sobic002G415100 Sobic003G280200--Sobic002G415100 Sobic009G139400 Sobic009G139400 Sobic003G280200--Sobic009G139400 Sobic003G297600 Sobic003G297600 Sobic003G280200--Sobic003G297600 Sobic009G077800 Sobic009G077800 Sobic003G280200--Sobic009G077800 Sobic003G280200--Sobic005G029200 Sobic003G364000 Sobic003G364000 Sobic003G280200--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G280200--Sobic002G004900 Sobic002G034800 Sobic002G034800 Sobic003G280200--Sobic002G034800 Sobic002G203700 Sobic002G203700 Sobic003G156200--Sobic002G203700 Sobic003G156200--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic003G156200--Sobic004G313100 Sobic003G156200--Sobic003G280200 Sobic003G156200--Sobic002G415100 Sobic003G301600 Sobic003G301600 Sobic003G156200--Sobic003G301600 Sobic003G156200--Sobic010G213700 Sobic003G156200--Sobic005G029200 Sobic003G156200--Sobic004G148200 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic007G227300 Sobic007G227300 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic006G268800 Sobic006G268800 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic003G200700 Sobic003G200700 Sobic004G148200--Sobic003G200700 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic005G029200--Sobic003G297600 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic005G029200--Sobic009G077800 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic010G084400 Sobic010G084400 Sobic009G128700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic009G128700--Sobic003G252800 Sobic003G426300 Sobic003G426300 Sobic009G128700--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic009G128700--Sobic005G101800 Sobic010G239300 Sobic010G239300 Sobic009G128700--Sobic010G239300 Sobic009G128700--Sobic002G415100 Sobic009G128700--Sobic003G426000 Sobic006G099900 Sobic006G099900 Sobic009G128700--Sobic006G099900 Sobic009G128700--Sobic003G280200 Sobic003G280100--Sobic004G148200 Sobic003G280100--Sobic005G029200 Sobic010G072100 Sobic010G072100 Sobic003G280100--Sobic010G072100 Sobic003G437100 Sobic003G437100 Sobic003G280100--Sobic003G437100 Sobic003G280100--Sobic003G417700 Sobic003G280100--Sobic010G213700 Sobic003G280100--Sobic009G128700 Sobic003G280100--Sobic003G426300 Sobic003G280100--Sobic007G227300 Sobic010G213700--Sobic005G029200 Sobic002G366600 Sobic002G366600 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic010G213700--Sobic009G139400 Sobic010G213700--Sobic004G148200 Sobic010G213700--Sobic003G297600 Sobic010G213700--Sobic002G415100 Sobic010G213700--Sobic004G189400 Sobic010G213700--Sobic003G280200 Sobic002G195400 Sobic002G195400 Sobic003G426000--Sobic002G195400 Sobic003G426000--Sobic009G128700 Sobic007G067600 Sobic007G067600 Sobic003G426000--Sobic007G067600 Sobic004G304300 Sobic004G304300 Sobic003G426000--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic003G426000--Sobic003G430600 Sobic003G426000--Sobic003G426300 Sobic003G426000--Sobic005G101800 Sobic001G319700 Sobic001G319700 Sobic003G426000--Sobic001G319700 Sobic003G426000--Sobic003G200700 Sobic008G027600 Sobic008G027600 Sobic008G158100--Sobic008G027600 Sobic008G158100--Sobic004G148200 Sobic002G139300 Sobic002G139300 Sobic008G158100--Sobic002G139300 Sobic008G158100--Sobic003G417700 Sobic001G187200 Sobic001G187200 Sobic008G158100--Sobic001G187200 Sobic005G011200 Sobic005G011200 Sobic008G158100--Sobic005G011200 Sobic008G158100--Sobic006G268800 Sobic002G369400 Sobic002G369400 Sobic008G158100--Sobic002G369400 Sobic008G158100--Sobic009G145500
Octagon: transcription factors


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