Gene annotation
Transcriptome id Sobic.001G318600.2
Synonym GSTU18, GST29, Sb01g030940, ATGSTU18
Functional annotation glutathione S-transferase, putative, expressed
UniProt A0A1Z5S8L6
Pfam PF14497 PF02798
Panther DB PTHR11260 PTHR11260:SF244
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10360 : glutathione S-transferase TAU 18
RAP-DB (Rice) LOC_Os10g38489.1 : glutathione S-transferase GSTU6, putative, expressed
MaizeGDB (Corn) Zm00025a027944 , Zm00025a003103 , Zm00025a003102 , Zm00025a003107 , Zm00025a003108 , Zm00025a003099 , Zm00025a025995
Brachypodium KQJ97560 , KQJ97546 , KQJ97544 , PNT61713 , KQK09276 , KQJ97557 , KQK11859 , KQJ97553 , KQK23716
Barley HORVU7Hr1G108570.2 , HORVU7Hr1G108570.3 , HORVU7Hr1G108570.1 , HORVU1Hr1G001560.6 , HORVU1Hr1G001560.5 , HORVU1Hr1G001560.4 , HORVU1Hr1G001560.3 , HORVU1Hr1G001560.2 , HORVU1Hr1G001560.1 , HORVU6Hr1G026810.3 , HORVU6Hr1G026810.2 , HORVU6Hr1G026810.1
Wheat TraesCS6D02G127700 , TraesCS6B02G167600 , TraesCS1B02G194600 , TraesCS1B02G194700 , TraesCS6A02G139100 , TraesCS1A02G186600 , TraesCS6D02G127800 , TraesCS1D02G189800 , TraesCS1A02G186700 , TraesCS1B02G021400 , TraesCS1D02G017200 , TraesCS6B02G167400 , TraesCSU02G087600 , TraesCS6B02G167500 , TraesCS6B02G167300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101700 dirigent, putative, expressed -
2 Sobic.005G101600 dirigent, putative, expressed -
3 Sobic.006G268800 transporter family protein, putative, expressed -
4 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
6 Sobic.004G148200 Cupin domain containing protein, expressed -
7 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.001G187200 expressed protein -
11 Sobic.003G252800 hypothetical protein -
12 Sobic.005G206601 - -
13 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
14 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
15 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.007G061300 - -
19 Sobic.004G189400 expressed protein -
20 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G318600 Sobic001G318600 Sobic005G101700 Sobic005G101700 Sobic001G318600--Sobic005G101700 Sobic005G101600 Sobic005G101600 Sobic001G318600--Sobic005G101600 Sobic006G268800 Sobic006G268800 Sobic001G318600--Sobic006G268800 Sobic007G227300 Sobic007G227300 Sobic001G318600--Sobic007G227300 Sobic003G200700 Sobic003G200700 Sobic001G318600--Sobic003G200700 Sobic004G148200 Sobic004G148200 Sobic001G318600--Sobic004G148200 Sobic001G400800 Sobic001G400800 Sobic001G318600--Sobic001G400800 Sobic010G084400 Sobic010G084400 Sobic001G318600--Sobic010G084400 Sobic010G084100 Sobic010G084100 Sobic001G318600--Sobic010G084100 Sobic005G101700--Sobic005G101600 Sobic005G101700--Sobic001G318600 Sobic005G101700--Sobic003G200700 Sobic005G101700--Sobic007G227300 Sobic005G101800 Sobic005G101800 Sobic005G101700--Sobic005G101800 Sobic005G101700--Sobic001G400800 Sobic005G101700--Sobic010G084400 Sobic010G117900 Sobic010G117900 Sobic005G101700--Sobic010G117900 Sobic005G101700--Sobic004G148200 Sobic005G101600--Sobic005G101700 Sobic005G101600--Sobic001G318600 Sobic005G101600--Sobic001G400800 Sobic005G101600--Sobic007G227300 Sobic005G206601 Sobic005G206601 Sobic005G101600--Sobic005G206601 Sobic005G101600--Sobic005G101800 Sobic005G101600--Sobic010G084400 Sobic003G437100 Sobic003G437100 Sobic005G101600--Sobic003G437100 Sobic005G101600--Sobic003G200700 Sobic006G103000 Sobic006G103000 Sobic006G268800--Sobic006G103000 Sobic006G268800--Sobic007G227300 Sobic006G268800--Sobic003G200700 Sobic006G268800--Sobic004G148200 Sobic001G402200 Sobic001G402200 Sobic006G268800--Sobic001G402200 Sobic010G211900 Sobic010G211900 Sobic006G268800--Sobic010G211900 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic006G099900 Sobic006G099900 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic007G227300--Sobic005G206601 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic003G200700--Sobic010G211900 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic003G200700--Sobic006G099900 Sobic001G231400 Sobic001G231400 Sobic003G200700--Sobic001G231400 Sobic003G200700--Sobic005G101800 Sobic004G243100 Sobic004G243100 Sobic003G200700--Sobic004G243100 Sobic005G029200 Sobic005G029200 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700 Sobic001G400800--Sobic007G227300 Sobic001G400700 Sobic001G400700 Sobic001G400800--Sobic001G400700 Sobic004G245800 Sobic004G245800 Sobic001G400800--Sobic004G245800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G177800 Sobic001G177800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic001G400800--Sobic010G084400 Sobic001G187200 Sobic001G187200 Sobic001G400800--Sobic001G187200 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic010G084400--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic010G084400--Sobic001G317200 Sobic009G128700 Sobic009G128700 Sobic010G084400--Sobic009G128700 Sobic010G084400--Sobic007G227300 Sobic010G084400--Sobic010G117900 Sobic010G239300 Sobic010G239300 Sobic010G084400--Sobic010G239300 Sobic010G084400--Sobic004G189400 Sobic010G084700 Sobic010G084700 Sobic010G084100--Sobic010G084700 Sobic004G071650 Sobic004G071650 Sobic010G084100--Sobic004G071650 Sobic005G045900 Sobic005G045900 Sobic010G084100--Sobic005G045900 Sobic004G221500 Sobic004G221500 Sobic010G084100--Sobic004G221500 Sobic003G286600 Sobic003G286600 Sobic010G084100--Sobic003G286600 Sobic001G192200 Sobic001G192200 Sobic010G084100--Sobic001G192200 Sobic002G184200 Sobic002G184200 Sobic010G084100--Sobic002G184200 Sobic007G067400 Sobic007G067400 Sobic010G084100--Sobic007G067400 Sobic010G084100--Sobic006G099900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.