Gene annotation
Transcriptome id Sobic.005G045900.1
Synonym Sb05g003800
Functional annotation -
UniProt A0A1Z5RHU2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g06150.1 : basic proline-rich protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034153
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
2 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
3 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
4 Sobic.003G317100 expressed protein -
5 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
6 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
7 Sobic.010G044400 Up-reguralion under heat(PubMedID : 24916767)@GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
9 Sobic.004G071650 - -
10 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.010G176600 - -
12 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
13 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
15 Sobic.007G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
16 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
17 Sobic.001G423800 DNA binding protein, putative, expressed -
18 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
19 Sobic.005G063100 expressed protein -
20 Sobic.002G263400 expressed protein -


Gene co-expression network
sample Sobic005G045900 Sobic005G045900 Sobic010G084100 Sobic010G084100 Sobic005G045900--Sobic010G084100 Sobic003G286600 Sobic003G286600 Sobic005G045900--Sobic003G286600 Sobic004G221500 Sobic004G221500 Sobic005G045900--Sobic004G221500 Sobic003G317100 Sobic003G317100 Sobic005G045900--Sobic003G317100 Sobic010G084700 Sobic010G084700 Sobic005G045900--Sobic010G084700 Sobic007G155200 Sobic007G155200 Sobic005G045900--Sobic007G155200 Sobic010G044400 Sobic010G044400 Sobic005G045900--Sobic010G044400 Sobic006G084600 Sobic006G084600 Sobic005G045900--Sobic006G084600 Sobic004G071650 Sobic004G071650 Sobic005G045900--Sobic004G071650 Sobic010G084100--Sobic010G084700 Sobic010G084100--Sobic004G071650 Sobic010G084100--Sobic005G045900 Sobic010G084100--Sobic004G221500 Sobic010G084100--Sobic003G286600 Sobic001G192200 Sobic001G192200 Sobic010G084100--Sobic001G192200 Sobic002G184200 Sobic002G184200 Sobic010G084100--Sobic002G184200 Sobic007G067400 Sobic007G067400 Sobic010G084100--Sobic007G067400 Sobic006G099900 Sobic006G099900 Sobic010G084100--Sobic006G099900 Sobic010G176600 Sobic010G176600 Sobic003G286600--Sobic010G176600 Sobic008G050600 Sobic008G050600 Sobic003G286600--Sobic008G050600 Sobic005G063100 Sobic005G063100 Sobic003G286600--Sobic005G063100 Sobic003G286600--Sobic006G099900 Sobic004G208700 Sobic004G208700 Sobic003G286600--Sobic004G208700 Sobic002G140400 Sobic002G140400 Sobic003G286600--Sobic002G140400 Sobic003G345100 Sobic003G345100 Sobic003G286600--Sobic003G345100 Sobic003G286600--Sobic003G317100 Sobic009G164600 Sobic009G164600 Sobic003G286600--Sobic009G164600 Sobic004G221500--Sobic010G084700 Sobic004G221500--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic004G221500--Sobic001G348700 Sobic004G221500--Sobic002G184200 Sobic001G423800 Sobic001G423800 Sobic004G221500--Sobic001G423800 Sobic004G221500--Sobic010G084100 Sobic003G252800 Sobic003G252800 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic010G117900 Sobic010G117900 Sobic004G221500--Sobic010G117900 Sobic003G317100--Sobic003G286600 Sobic003G317100--Sobic006G099900 Sobic003G317100--Sobic006G084600 Sobic003G317100--Sobic004G221500 Sobic003G352300 Sobic003G352300 Sobic003G317100--Sobic003G352300 Sobic003G317100--Sobic005G045900 Sobic001G435000 Sobic001G435000 Sobic003G317100--Sobic001G435000 Sobic003G317100--Sobic010G044400 Sobic004G229800 Sobic004G229800 Sobic003G317100--Sobic004G229800 Sobic010G084700--Sobic004G221500 Sobic010G084700--Sobic010G084100 Sobic010G084700--Sobic010G117900 Sobic010G084700--Sobic002G184200 Sobic010G084700--Sobic010G176600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic010G084700--Sobic001G423800 Sobic010G084700--Sobic001G192200 Sobic009G224100 Sobic009G224100 Sobic007G155200--Sobic009G224100 Sobic007G155200--Sobic002G184200 Sobic007G155200--Sobic005G045900 Sobic007G155200--Sobic002G140400 Sobic004G037000 Sobic004G037000 Sobic007G155200--Sobic004G037000 Sobic010G196600 Sobic010G196600 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400 Sobic010G044400--Sobic003G317100 Sobic010G044400--Sobic005G045900 Sobic010G044400--Sobic003G286600 Sobic001G025101 Sobic001G025101 Sobic010G044400--Sobic001G025101 Sobic003G116800 Sobic003G116800 Sobic010G044400--Sobic003G116800 Sobic003G088500 Sobic003G088500 Sobic010G044400--Sobic003G088500 Sobic010G044400--Sobic009G164600 Sobic001G025300 Sobic001G025300 Sobic010G044400--Sobic001G025300 Sobic005G051200 Sobic005G051200 Sobic010G044400--Sobic005G051200 Sobic006G084600--Sobic004G221500 Sobic007G067350 Sobic007G067350 Sobic006G084600--Sobic007G067350 Sobic007G155100 Sobic007G155100 Sobic006G084600--Sobic007G155100 Sobic006G084600--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic006G084600--Sobic003G437200 Sobic007G066932 Sobic007G066932 Sobic006G084600--Sobic007G066932 Sobic006G084600--Sobic001G348700 Sobic010G084300 Sobic010G084300 Sobic006G084600--Sobic010G084300 Sobic001G231600 Sobic001G231600 Sobic006G084600--Sobic001G231600 Sobic004G071650--Sobic010G084100 Sobic004G071650--Sobic010G084700 Sobic004G071650--Sobic003G116800 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300
Octagon: transcription factors


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