Gene annotation
Transcriptome id Sobic.001G025101.1
Synonym -
Functional annotation -
UniProt C5WU07
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF839
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26740 : soluble epoxide hydrolase
RAP-DB (Rice) LOC_Os03g61360.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016385 , Zm00025a016384 , Zm00025a008914
Brachypodium KQK12345 , KQK12347
Barley HORVU5Hr1G115720.9 , HORVU5Hr1G115720.8 , HORVU5Hr1G115720.7 , HORVU5Hr1G115720.5 , HORVU5Hr1G115720.1 , HORVU5Hr1G115720.4 , HORVU5Hr1G115720.3 , HORVU5Hr1G115720.2 , HORVU5Hr1G115800.1 , HORVU5Hr1G115720.16 , HORVU5Hr1G115720.15 , HORVU5Hr1G115720.13 , HORVU5Hr1G115720.10 , HORVU5Hr1G115720.18 , HORVU5Hr1G115780.2
Wheat TraesCS5B02G507300 , TraesCSU02G047100 , TraesCSU02G168300 , TraesCS3B02G606900 , TraesCS5D02G507000 , TraesCS3A02G538800 , TraesCSU02G202200 , TraesCS5B02G507200 , TraesCS4A02G366100 , TraesCS4A02G366100 , TraesCS5D02G507100 , TraesCS5D02G507300 , TraesCS4A02G366000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G088500 multicopper oxidase domain containing protein, expressed -
4 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
5 Sobic.003G087300 nuclease PA3, putative, expressed -
6 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
7 Sobic.004G245500 expressed protein -
8 Sobic.010G044400 Up-reguralion under heat(PubMedID : 24916767)@GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
11 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
12 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
13 Sobic.005G063100 expressed protein -
14 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
15 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
16 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
18 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
19 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
20 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)


Gene co-expression network
sample Sobic001G025101 Sobic001G025101 Sobic001G025300 Sobic001G025300 Sobic001G025101--Sobic001G025300 Sobic002G416600 Sobic002G416600 Sobic001G025101--Sobic002G416600 Sobic003G088500 Sobic003G088500 Sobic001G025101--Sobic003G088500 Sobic005G051200 Sobic005G051200 Sobic001G025101--Sobic005G051200 Sobic003G087300 Sobic003G087300 Sobic001G025101--Sobic003G087300 Sobic004G166700 Sobic004G166700 Sobic001G025101--Sobic004G166700 Sobic004G245500 Sobic004G245500 Sobic001G025101--Sobic004G245500 Sobic010G044400 Sobic010G044400 Sobic001G025101--Sobic010G044400 Sobic003G345100 Sobic003G345100 Sobic001G025101--Sobic003G345100 Sobic001G025300--Sobic001G025101 Sobic001G025300--Sobic002G416600 Sobic002G183200 Sobic002G183200 Sobic001G025300--Sobic002G183200 Sobic003G286600 Sobic003G286600 Sobic001G025300--Sobic003G286600 Sobic001G025300--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic001G025300--Sobic001G317200 Sobic001G025300--Sobic004G166700 Sobic006G099900 Sobic006G099900 Sobic001G025300--Sobic006G099900 Sobic001G070800 Sobic001G070800 Sobic001G025300--Sobic001G070800 Sobic002G416600--Sobic003G087300 Sobic002G416600--Sobic005G051200 Sobic002G416600--Sobic001G317200 Sobic002G416600--Sobic001G025300 Sobic002G416600--Sobic001G070800 Sobic002G416600--Sobic004G166700 Sobic008G050600 Sobic008G050600 Sobic002G416600--Sobic008G050600 Sobic001G252300 Sobic001G252300 Sobic002G416600--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G416600--Sobic010G239300 Sobic003G088500--Sobic004G245500 Sobic003G088500--Sobic001G025101 Sobic003G088500--Sobic005G051200 Sobic009G164600 Sobic009G164600 Sobic003G088500--Sobic009G164600 Sobic003G088500--Sobic003G087300 Sobic003G088500--Sobic002G416600 Sobic003G088500--Sobic001G317200 Sobic003G240600 Sobic003G240600 Sobic003G088500--Sobic003G240600 Sobic003G088500--Sobic010G044400 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic005G051200--Sobic009G164600 Sobic005G051200--Sobic003G345100 Sobic005G051200--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic003G087300--Sobic002G416600 Sobic010G052700 Sobic010G052700 Sobic003G087300--Sobic010G052700 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic002G125700 Sobic002G125700 Sobic003G087300--Sobic002G125700 Sobic003G087300--Sobic001G252300 Sobic004G166700--Sobic001G252300 Sobic009G229000 Sobic009G229000 Sobic004G166700--Sobic009G229000 Sobic004G166700--Sobic002G416600 Sobic009G234100 Sobic009G234100 Sobic004G166700--Sobic009G234100 Sobic004G166700--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic004G166700--Sobic004G208700 Sobic006G092500 Sobic006G092500 Sobic004G166700--Sobic006G092500 Sobic004G166700--Sobic003G345100 Sobic004G166700--Sobic005G063100 Sobic004G245500--Sobic005G051200 Sobic004G245500--Sobic002G416600 Sobic004G245500--Sobic003G088500 Sobic004G245500--Sobic003G087300 Sobic004G245500--Sobic009G164600 Sobic004G245500--Sobic001G025101 Sobic004G245500--Sobic001G252300 Sobic004G245500--Sobic001G317200 Sobic004G245500--Sobic004G166700 Sobic003G317100 Sobic003G317100 Sobic010G044400--Sobic003G317100 Sobic005G045900 Sobic005G045900 Sobic010G044400--Sobic005G045900 Sobic010G044400--Sobic003G286600 Sobic010G044400--Sobic001G025101 Sobic003G116800 Sobic003G116800 Sobic010G044400--Sobic003G116800 Sobic010G044400--Sobic003G088500 Sobic010G044400--Sobic009G164600 Sobic010G044400--Sobic001G025300 Sobic010G044400--Sobic005G051200 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic001G140900 Sobic001G140900 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic005G099000 Sobic005G099000 Sobic003G345100--Sobic005G099000 Sobic009G159400 Sobic009G159400 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic003G345100--Sobic001G435000
Octagon: transcription factors


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