Gene annotation
Transcriptome id Sobic.004G245500.1
Synonym
Functional annotation expressed protein
UniProt A0A194YSJ5
Pfam -
Panther DB PTHR35547:SF4 PTHR35547
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g50430.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
2 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G088500 multicopper oxidase domain containing protein, expressed -
4 Sobic.003G087300 nuclease PA3, putative, expressed -
5 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
6 Sobic.001G025101 - -
7 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
10 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.009G231000 - -
12 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
13 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
14 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
15 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
16 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
18 Sobic.009G229000 expressed protein -
19 Sobic.001G354200 O-methyltransferase, putative, expressed -
20 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -


Gene co-expression network
sample Sobic004G245500 Sobic004G245500 Sobic005G051200 Sobic005G051200 Sobic004G245500--Sobic005G051200 Sobic002G416600 Sobic002G416600 Sobic004G245500--Sobic002G416600 Sobic003G088500 Sobic003G088500 Sobic004G245500--Sobic003G088500 Sobic003G087300 Sobic003G087300 Sobic004G245500--Sobic003G087300 Sobic009G164600 Sobic009G164600 Sobic004G245500--Sobic009G164600 Sobic001G025101 Sobic001G025101 Sobic004G245500--Sobic001G025101 Sobic001G252300 Sobic001G252300 Sobic004G245500--Sobic001G252300 Sobic001G317200 Sobic001G317200 Sobic004G245500--Sobic001G317200 Sobic004G166700 Sobic004G166700 Sobic004G245500--Sobic004G166700 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic008G050600 Sobic008G050600 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic005G051200--Sobic009G164600 Sobic003G345100 Sobic003G345100 Sobic005G051200--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G051200--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic002G416600--Sobic003G087300 Sobic002G416600--Sobic005G051200 Sobic002G416600--Sobic001G317200 Sobic001G025300 Sobic001G025300 Sobic002G416600--Sobic001G025300 Sobic001G070800 Sobic001G070800 Sobic002G416600--Sobic001G070800 Sobic002G416600--Sobic004G166700 Sobic002G416600--Sobic008G050600 Sobic002G416600--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G416600--Sobic010G239300 Sobic003G088500--Sobic004G245500 Sobic003G088500--Sobic001G025101 Sobic003G088500--Sobic005G051200 Sobic003G088500--Sobic009G164600 Sobic003G088500--Sobic003G087300 Sobic003G088500--Sobic002G416600 Sobic003G088500--Sobic001G317200 Sobic003G240600 Sobic003G240600 Sobic003G088500--Sobic003G240600 Sobic010G044400 Sobic010G044400 Sobic003G088500--Sobic010G044400 Sobic003G087300--Sobic002G416600 Sobic010G052700 Sobic010G052700 Sobic003G087300--Sobic010G052700 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic002G125700 Sobic002G125700 Sobic003G087300--Sobic002G125700 Sobic003G087300--Sobic001G252300 Sobic009G164600--Sobic003G345100 Sobic009G164600--Sobic008G050600 Sobic009G164600--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic009G164600--Sobic004G208700 Sobic009G164600--Sobic003G286600 Sobic009G164600--Sobic005G063100 Sobic001G140900 Sobic001G140900 Sobic009G164600--Sobic001G140900 Sobic009G234100 Sobic009G234100 Sobic009G164600--Sobic009G234100 Sobic001G435000 Sobic001G435000 Sobic009G164600--Sobic001G435000 Sobic001G025101--Sobic001G025300 Sobic001G025101--Sobic002G416600 Sobic001G025101--Sobic003G088500 Sobic001G025101--Sobic005G051200 Sobic001G025101--Sobic003G087300 Sobic001G025101--Sobic004G166700 Sobic001G025101--Sobic004G245500 Sobic001G025101--Sobic010G044400 Sobic001G025101--Sobic003G345100 Sobic002G414600 Sobic002G414600 Sobic001G252300--Sobic002G414600 Sobic001G252300--Sobic004G166700 Sobic001G252300--Sobic005G051200 Sobic001G252300--Sobic004G208700 Sobic001G252300--Sobic001G317200 Sobic003G297600 Sobic003G297600 Sobic001G252300--Sobic003G297600 Sobic001G252300--Sobic002G416600 Sobic001G252300--Sobic008G050600 Sobic001G252300--Sobic003G286600 Sobic001G317200--Sobic005G051200 Sobic006G099900 Sobic006G099900 Sobic001G317200--Sobic006G099900 Sobic003G252800 Sobic003G252800 Sobic001G317200--Sobic003G252800 Sobic010G084400 Sobic010G084400 Sobic001G317200--Sobic010G084400 Sobic001G317200--Sobic003G286600 Sobic001G317200--Sobic008G050600 Sobic001G317200--Sobic003G240600 Sobic005G101800 Sobic005G101800 Sobic001G317200--Sobic005G101800 Sobic001G317200--Sobic002G416600 Sobic004G166700--Sobic001G252300 Sobic009G229000 Sobic009G229000 Sobic004G166700--Sobic009G229000 Sobic004G166700--Sobic002G416600 Sobic004G166700--Sobic009G234100 Sobic004G166700--Sobic005G051200 Sobic004G166700--Sobic004G208700 Sobic006G092500 Sobic006G092500 Sobic004G166700--Sobic006G092500 Sobic004G166700--Sobic003G345100 Sobic004G166700--Sobic005G063100
Octagon: transcription factors


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