Gene annotation
Transcriptome id Sobic.005G050032.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGU0
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g07310.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012910
Brachypodium KQJ92054 , PNT65375
Barley HORVU0Hr1G020370.1 , HORVU7Hr1G113710.3 , HORVU0Hr1G020380.1 , HORVU7Hr1G113710.1 , HORVU7Hr1G040810.1
Wheat TraesCS7A02G202300 , TraesCS3D02G141600 , TraesCS7B02G109400 , TraesCS7D02G205800 , TraesCS7B02G109200 , TraesCS7D02G205500 , TraesCS7D02G205600 , TraesCS7B02G109300 , TraesCS3A02G312700 , TraesCS7B02G109500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.003G376300 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
3 Sobic.009G123733 - -
4 Sobic.001G232500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.003G207900 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
6 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.002G369301 - -
8 Sobic.001G187400 cytochrome P450, putative, expressed -
9 Sobic.002G090100 - -
10 Sobic.002G090100 - -
11 Sobic.002G090100 - -
12 Sobic.002G090100 - -
13 Sobic.002G090100 - -
14 Sobic.002G090100 - -
15 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
16 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
18 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G381400 expressed protein -
20 Sobic.008G112900 OsFBX452 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G050032 Sobic005G050032 Sobic004G092800 Sobic004G092800 Sobic005G050032--Sobic004G092800 Sobic003G376300 Sobic003G376300 Sobic005G050032--Sobic003G376300 Sobic009G123733 Sobic009G123733 Sobic005G050032--Sobic009G123733 Sobic001G232500 Sobic001G232500 Sobic005G050032--Sobic001G232500 Sobic003G207900 Sobic003G207900 Sobic005G050032--Sobic003G207900 Sobic006G170000 Sobic006G170000 Sobic005G050032--Sobic006G170000 Sobic002G369301 Sobic002G369301 Sobic005G050032--Sobic002G369301 Sobic001G187400 Sobic001G187400 Sobic005G050032--Sobic001G187400 Sobic002G090100 Sobic002G090100 Sobic005G050032--Sobic002G090100 Sobic004G092800--Sobic001G232500 Sobic001G065900 Sobic001G065900 Sobic004G092800--Sobic001G065900 Sobic003G370600 Sobic003G370600 Sobic004G092800--Sobic003G370600 Sobic002G388800 Sobic002G388800 Sobic004G092800--Sobic002G388800 Sobic001G425500 Sobic001G425500 Sobic004G092800--Sobic001G425500 Sobic004G263100 Sobic004G263100 Sobic004G092800--Sobic004G263100 Sobic009G194400 Sobic009G194400 Sobic004G092800--Sobic009G194400 Sobic004G092800--Sobic002G369301 Sobic004G092800--Sobic006G170000 Sobic003G376300--Sobic005G050032 Sobic003G376300--Sobic006G170000 Sobic003G376300--Sobic002G369301 Sobic003G376300--Sobic009G123733 Sobic003G376300--Sobic001G232500 Sobic003G376300--Sobic004G092800 Sobic003G376300--Sobic003G370600 Sobic003G082100 Sobic003G082100 Sobic003G376300--Sobic003G082100 Sobic003G082200 Sobic003G082200 Sobic003G376300--Sobic003G082200 Sobic009G123733--Sobic004G092800 Sobic004G251800 Sobic004G251800 Sobic009G123733--Sobic004G251800 Sobic009G123733--Sobic001G187400 Sobic009G123733--Sobic005G050032 Sobic009G123733--Sobic004G263100 Sobic009G123733--Sobic002G388800 Sobic005G013400 Sobic005G013400 Sobic009G123733--Sobic005G013400 Sobic002G390000 Sobic002G390000 Sobic009G123733--Sobic002G390000 Sobic008G079500 Sobic008G079500 Sobic009G123733--Sobic008G079500 Sobic001G232500--Sobic004G092800 Sobic008G102900 Sobic008G102900 Sobic001G232500--Sobic008G102900 Sobic001G232500--Sobic001G425500 Sobic001G425600 Sobic001G425600 Sobic001G232500--Sobic001G425600 Sobic001G232500--Sobic002G369301 Sobic001G232500--Sobic001G187400 Sobic001G232500--Sobic003G370600 Sobic001G232500--Sobic002G388800 Sobic003G112400 Sobic003G112400 Sobic001G232500--Sobic003G112400 Sobic001G100501 Sobic001G100501 Sobic003G207900--Sobic001G100501 Sobic003G207900--Sobic006G170000 Sobic001G295700 Sobic001G295700 Sobic003G207900--Sobic001G295700 Sobic003G207900--Sobic004G092800 Sobic003G207900--Sobic003G370600 Sobic001G138200 Sobic001G138200 Sobic003G207900--Sobic001G138200 Sobic004G097100 Sobic004G097100 Sobic003G207900--Sobic004G097100 Sobic009G136400 Sobic009G136400 Sobic003G207900--Sobic009G136400 Sobic007G118301 Sobic007G118301 Sobic003G207900--Sobic007G118301 Sobic006G170000--Sobic003G370600 Sobic004G352000 Sobic004G352000 Sobic006G170000--Sobic004G352000 Sobic001G256700 Sobic001G256700 Sobic006G170000--Sobic001G256700 Sobic004G004500 Sobic004G004500 Sobic006G170000--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic006G170000--Sobic008G187001 Sobic004G246600 Sobic004G246600 Sobic006G170000--Sobic004G246600 Sobic006G170000--Sobic004G092800 Sobic002G388900 Sobic002G388900 Sobic006G170000--Sobic002G388900 Sobic006G170000--Sobic009G194400 Sobic002G369301--Sobic001G187400 Sobic002G369301--Sobic004G092800 Sobic002G369301--Sobic003G370600 Sobic002G369301--Sobic006G170000 Sobic002G369301--Sobic001G232500 Sobic001G279701 Sobic001G279701 Sobic002G369301--Sobic001G279701 Sobic001G187500 Sobic001G187500 Sobic002G369301--Sobic001G187500 Sobic002G369301--Sobic001G425500 Sobic002G369301--Sobic004G352000 Sobic001G187400--Sobic001G187500 Sobic001G187400--Sobic002G369301 Sobic001G187400--Sobic003G370600 Sobic001G187400--Sobic002G388800 Sobic001G187400--Sobic004G092800 Sobic001G187400--Sobic001G232500 Sobic007G039500 Sobic007G039500 Sobic001G187400--Sobic007G039500 Sobic001G187400--Sobic006G170000 Sobic001G187400--Sobic009G123733 Sobic002G090100--Sobic002G090100 Sobic001G381400 Sobic001G381400 Sobic002G090100--Sobic001G381400 Sobic007G159100 Sobic007G159100 Sobic002G090100--Sobic007G159100 Sobic002G102132 Sobic002G102132 Sobic002G090100--Sobic002G102132 Sobic002G090100--Sobic004G263100
Octagon: transcription factors


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