Gene annotation
Transcriptome id Sobic.003G060100.1
Synonym Sb03g005160
Functional annotation expressed protein
UniProt C5XP62
Pfam -
Panther DB PTHR22814 PTHR22814:SF118
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01490 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os01g14700.1 : expressed protein
MaizeGDB (Corn) Zm00025a023915 , Zm00025a023916
Brachypodium PNT70253 , PNT70254
Barley HORVU3Hr1G034130.1 , HORVU5Hr1G051560.2 , HORVU5Hr1G051560.3 , HORVU5Hr1G051560.1 , HORVU5Hr1G051560.4 , HORVU5Hr1G051580.1 , HORVU5Hr1G051580.2 , HORVU5Hr1G051580.3 , HORVU3Hr1G034120.1 , HORVU3Hr1G034160.1 , HORVU3Hr1G034160.3 , HORVU3Hr1G034160.2
Wheat TraesCS3A02G165400 , TraesCS3B02G200300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G487500 expressed protein -
3 Sobic.009G194400 expressed protein -
4 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
5 Sobic.005G013500 WRKY52, expressed -
6 Sobic.003G112400 expressed protein -
7 Sobic.004G251800 leaf senescence related protein, putative, expressed -
8 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
9 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
10 Sobic.004G097100 F-box family protein, putative, expressed -
11 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
12 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
15 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
17 Sobic.004G246600 expressed protein -
18 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.007G100032 - -
20 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic003G060100 Sobic003G060100 Sobic001G065900 Sobic001G065900 Sobic003G060100--Sobic001G065900 Sobic001G487500 Sobic001G487500 Sobic003G060100--Sobic001G487500 Sobic009G194400 Sobic009G194400 Sobic003G060100--Sobic009G194400 Sobic002G388800 Sobic002G388800 Sobic003G060100--Sobic002G388800 Sobic005G013500 Sobic005G013500 Sobic003G060100--Sobic005G013500 Sobic003G112400 Sobic003G112400 Sobic003G060100--Sobic003G112400 Sobic004G251800 Sobic004G251800 Sobic003G060100--Sobic004G251800 Sobic004G341000 Sobic004G341000 Sobic003G060100--Sobic004G341000 Sobic002G238600 Sobic002G238600 Sobic003G060100--Sobic002G238600 Sobic004G263100 Sobic004G263100 Sobic001G065900--Sobic004G263100 Sobic004G165800 Sobic004G165800 Sobic001G065900--Sobic004G165800 Sobic002G100832 Sobic002G100832 Sobic001G065900--Sobic002G100832 Sobic002G102132 Sobic002G102132 Sobic001G065900--Sobic002G102132 Sobic004G092800 Sobic004G092800 Sobic001G065900--Sobic004G092800 Sobic006G057500 Sobic006G057500 Sobic001G065900--Sobic006G057500 Sobic001G065900--Sobic004G251800 Sobic001G065900--Sobic002G388800 Sobic001G065900--Sobic004G341000 Sobic002G234400 Sobic002G234400 Sobic001G487500--Sobic002G234400 Sobic001G487500--Sobic003G060100 Sobic009G183900 Sobic009G183900 Sobic001G487500--Sobic009G183900 Sobic007G006300 Sobic007G006300 Sobic001G487500--Sobic007G006300 Sobic003G148300 Sobic003G148300 Sobic001G487500--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic001G487500--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic001G487500--Sobic001G195200 Sobic002G250000 Sobic002G250000 Sobic001G487500--Sobic002G250000 Sobic002G327201 Sobic002G327201 Sobic001G487500--Sobic002G327201 Sobic010G196600 Sobic010G196600 Sobic009G194400--Sobic010G196600 Sobic001G425500 Sobic001G425500 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic001G425600 Sobic001G425600 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic002G388900 Sobic002G388900 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic002G388800--Sobic004G092800 Sobic002G388800--Sobic001G065900 Sobic001G381400 Sobic001G381400 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G388800--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic002G388800--Sobic007G159100 Sobic002G388800--Sobic004G251800 Sobic004G229500 Sobic004G229500 Sobic005G013500--Sobic004G229500 Sobic005G013500--Sobic009G183900 Sobic004G246600 Sobic004G246600 Sobic005G013500--Sobic004G246600 Sobic009G032000 Sobic009G032000 Sobic005G013500--Sobic009G032000 Sobic009G144700 Sobic009G144700 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic004G294400 Sobic004G294400 Sobic005G013500--Sobic004G294400 Sobic005G013500--Sobic004G108200 Sobic003G112400--Sobic003G060100 Sobic010G135100 Sobic010G135100 Sobic003G112400--Sobic010G135100 Sobic003G112400--Sobic002G238600 Sobic006G104700 Sobic006G104700 Sobic003G112400--Sobic006G104700 Sobic003G112400--Sobic001G487500 Sobic002G327400 Sobic002G327400 Sobic003G112400--Sobic002G327400 Sobic003G112400--Sobic002G234400 Sobic001G232500 Sobic001G232500 Sobic003G112400--Sobic001G232500 Sobic003G112400--Sobic002G390000 Sobic004G251800--Sobic001G065900 Sobic004G251800--Sobic004G263100 Sobic004G251800--Sobic002G388800 Sobic004G251800--Sobic003G060100 Sobic004G094900 Sobic004G094900 Sobic004G251800--Sobic004G094900 Sobic004G251800--Sobic002G100832 Sobic004G251800--Sobic004G092800 Sobic004G251800--Sobic002G390000 Sobic004G251800--Sobic006G057500 Sobic004G341000--Sobic006G057500 Sobic004G341000--Sobic002G100832 Sobic004G341000--Sobic001G065900 Sobic004G341000--Sobic009G194400 Sobic004G341000--Sobic003G060100 Sobic004G341000--Sobic010G196600 Sobic004G341000--Sobic004G165800 Sobic004G341000--Sobic001G425500 Sobic008G054150 Sobic008G054150 Sobic004G341000--Sobic008G054150 Sobic002G238600--Sobic002G390000 Sobic002G238600--Sobic001G381400 Sobic005G180500 Sobic005G180500 Sobic002G238600--Sobic005G180500 Sobic002G238600--Sobic006G104700 Sobic002G238600--Sobic002G388800 Sobic002G238600--Sobic001G065900 Sobic002G238600--Sobic004G263100 Sobic002G238600--Sobic003G060100 Sobic002G238600--Sobic004G094900
Octagon: transcription factors


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