Gene annotation
Transcriptome id Sobic.003G211400.2
Synonym
Functional annotation OsFBX313 - F-box domain containing protein, expressed
UniProt A0A1W0VYD6
Pfam -
Panther DB PTHR33207 PTHR33207:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g32640.1 : OsFBX9 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G029400 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@WRKY DNA-binding protein 55("PubMedID : 26759170,PubMedID : 24597475")@WRKY46, expressed -
2 Sobic.009G003400 expressed protein -
3 Sobic.001G260000 SAP domain containing protein, expressed -
4 Sobic.003G076001 - -
5 Sobic.007G039500 aquaporin protein, putative, expressed K09874: aquaporin NIP
6 Sobic.005G203750 - -
7 Sobic.001G331301 - -
8 Sobic.004G071650 - -
9 Sobic.002G254000 expressed protein -
10 Sobic.006G053900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.005G045900 - -
12 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
13 Sobic.010G238900 oryzain beta chain precursor, putative, expressed -
14 Sobic.006G063400 proteasome subunit, putative, expressed -
15 Sobic.004G311750 - -
16 Sobic.010G176101 - -
17 Sobic.010G044400 Up-reguralion under heat(PubMedID : 24916767)@GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.004G128400 O-methyltransferase, putative, expressed -
19 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
20 Sobic.008G054150 - -


Gene co-expression network
sample Sobic003G211400 Sobic003G211400 Sobic008G029400 Sobic008G029400 Sobic003G211400--Sobic008G029400 Sobic009G003400 Sobic009G003400 Sobic003G211400--Sobic009G003400 Sobic001G260000 Sobic001G260000 Sobic003G211400--Sobic001G260000 Sobic003G076001 Sobic003G076001 Sobic003G211400--Sobic003G076001 Sobic007G039500 Sobic007G039500 Sobic003G211400--Sobic007G039500 Sobic005G203750 Sobic005G203750 Sobic003G211400--Sobic005G203750 Sobic001G331301 Sobic001G331301 Sobic003G211400--Sobic001G331301 Sobic004G071650 Sobic004G071650 Sobic003G211400--Sobic004G071650 Sobic002G254000 Sobic002G254000 Sobic003G211400--Sobic002G254000 Sobic004G228500 Sobic004G228500 Sobic008G029400--Sobic004G228500 Sobic008G029400--Sobic001G260000 Sobic003G060100 Sobic003G060100 Sobic008G029400--Sobic003G060100 Sobic009G144700 Sobic009G144700 Sobic008G029400--Sobic009G144700 Sobic008G054150 Sobic008G054150 Sobic008G029400--Sobic008G054150 Sobic004G108200 Sobic004G108200 Sobic008G029400--Sobic004G108200 Sobic006G207000 Sobic006G207000 Sobic008G029400--Sobic006G207000 Sobic006G104700 Sobic006G104700 Sobic008G029400--Sobic006G104700 Sobic008G029400--Sobic003G211400 Sobic009G003400--Sobic003G076001 Sobic010G016250 Sobic010G016250 Sobic009G003400--Sobic010G016250 Sobic009G003400--Sobic003G211400 Sobic002G109800 Sobic002G109800 Sobic009G003400--Sobic002G109800 Sobic001G260000--Sobic008G054150 Sobic001G343601 Sobic001G343601 Sobic001G260000--Sobic001G343601 Sobic007G169500 Sobic007G169500 Sobic001G260000--Sobic007G169500 Sobic009G009400 Sobic009G009400 Sobic001G260000--Sobic009G009400 Sobic004G311750 Sobic004G311750 Sobic001G260000--Sobic004G311750 Sobic004G115500 Sobic004G115500 Sobic001G260000--Sobic004G115500 Sobic002G146100 Sobic002G146100 Sobic001G260000--Sobic002G146100 Sobic001G260000--Sobic008G029400 Sobic002G182500 Sobic002G182500 Sobic001G260000--Sobic002G182500 Sobic003G076001--Sobic009G003400 Sobic003G076001--Sobic003G211400 Sobic003G076001--Sobic010G016250 Sobic003G076001--Sobic007G039500 Sobic006G053900 Sobic006G053900 Sobic003G076001--Sobic006G053900 Sobic003G076001--Sobic002G254000 Sobic002G403833 Sobic002G403833 Sobic003G076001--Sobic002G403833 Sobic003G076001--Sobic002G109800 Sobic007G039500--Sobic006G053900 Sobic007G039500--Sobic002G403833 Sobic004G094900 Sobic004G094900 Sobic007G039500--Sobic004G094900 Sobic007G039500--Sobic002G254000 Sobic002G403966 Sobic002G403966 Sobic007G039500--Sobic002G403966 Sobic001G187400 Sobic001G187400 Sobic007G039500--Sobic001G187400 Sobic002G390000 Sobic002G390000 Sobic007G039500--Sobic002G390000 Sobic001G381400 Sobic001G381400 Sobic007G039500--Sobic001G381400 Sobic005G171001 Sobic005G171001 Sobic007G039500--Sobic005G171001 Sobic001G487300 Sobic001G487300 Sobic005G203750--Sobic001G487300 Sobic005G203750--Sobic004G071650 Sobic008G060050 Sobic008G060050 Sobic005G203750--Sobic008G060050 Sobic010G044400 Sobic010G044400 Sobic005G203750--Sobic010G044400 Sobic005G203750--Sobic003G211400 Sobic001G403000 Sobic001G403000 Sobic005G203750--Sobic001G403000 Sobic001G341550 Sobic001G341550 Sobic005G203750--Sobic001G341550 Sobic010G176101 Sobic010G176101 Sobic005G203750--Sobic010G176101 Sobic003G152100 Sobic003G152100 Sobic005G203750--Sobic003G152100 Sobic004G128400 Sobic004G128400 Sobic001G331301--Sobic004G128400 Sobic003G227300 Sobic003G227300 Sobic001G331301--Sobic003G227300 Sobic001G335600 Sobic001G335600 Sobic001G331301--Sobic001G335600 Sobic004G111800 Sobic004G111800 Sobic001G331301--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic001G331301--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G331301--Sobic001G243500 Sobic009G106800 Sobic009G106800 Sobic001G331301--Sobic009G106800 Sobic005G206601 Sobic005G206601 Sobic001G331301--Sobic005G206601 Sobic006G277550 Sobic006G277550 Sobic001G331301--Sobic006G277550 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic003G286600 Sobic003G286600 Sobic004G071650--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic004G071650--Sobic005G206601 Sobic004G071650--Sobic001G487300 Sobic002G254000--Sobic002G403833 Sobic002G254000--Sobic002G403966 Sobic002G254000--Sobic007G039500 Sobic002G254000--Sobic006G053900 Sobic002G254000--Sobic004G094900 Sobic001G197300 Sobic001G197300 Sobic002G254000--Sobic001G197300 Sobic008G112900 Sobic008G112900 Sobic002G254000--Sobic008G112900 Sobic002G254000--Sobic001G187400 Sobic002G254000--Sobic001G381400
Octagon: transcription factors


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