Gene annotation
Transcriptome id Sobic.010G176101.1
Synonym -
Functional annotation -
UniProt A0A1W0VTN4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
2 Sobic.009G196400 expressed protein -
3 Sobic.004G071650 - -
4 Sobic.001G471300 AIR12, putative, expressed -
5 Sobic.008G076300 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.001G333400 SCP-like extracellular protein, expressed -
7 Sobic.002G044800 SAM dependent carboxyl methyltransferase, putative, expressed -
8 Sobic.010G016250 - -
9 Sobic.005G177500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
10 Sobic.010G238900 oryzain beta chain precursor, putative, expressed -
11 Sobic.005G203750 - -
12 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.003G211400 OsFBX313 - F-box domain containing protein, expressed -
14 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G025101 - -
16 Sobic.002G360100 ZOS3-12 - C2H2 zinc finger protein, expressed -
17 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.002G346100 - -
19 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -


Gene co-expression network
sample Sobic010G176101 Sobic010G176101 Sobic006G068300 Sobic006G068300 Sobic010G176101--Sobic006G068300 Sobic009G196400 Sobic009G196400 Sobic010G176101--Sobic009G196400 Sobic004G071650 Sobic004G071650 Sobic010G176101--Sobic004G071650 Sobic001G471300 Sobic001G471300 Sobic010G176101--Sobic001G471300 Sobic008G076300 Sobic008G076300 Sobic010G176101--Sobic008G076300 Sobic001G333400 Sobic001G333400 Sobic010G176101--Sobic001G333400 Sobic002G044800 Sobic002G044800 Sobic010G176101--Sobic002G044800 Sobic010G016250 Sobic010G016250 Sobic010G176101--Sobic010G016250 Sobic005G177500 Sobic005G177500 Sobic010G176101--Sobic005G177500 Sobic001G025101 Sobic001G025101 Sobic006G068300--Sobic001G025101 Sobic006G068300--Sobic010G176101 Sobic006G068300--Sobic009G196400 Sobic001G025300 Sobic001G025300 Sobic006G068300--Sobic001G025300 Sobic002G416600 Sobic002G416600 Sobic006G068300--Sobic002G416600 Sobic006G068300--Sobic004G071650 Sobic001G462700 Sobic001G462700 Sobic006G068300--Sobic001G462700 Sobic006G068300--Sobic005G177500 Sobic003G117600 Sobic003G117600 Sobic006G068300--Sobic003G117600 Sobic001G444400 Sobic001G444400 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic006G153100 Sobic006G153100 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic009G196400--Sobic001G333400 Sobic009G106800 Sobic009G106800 Sobic009G196400--Sobic009G106800 Sobic004G240600 Sobic004G240600 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic007G141500 Sobic007G141500 Sobic009G196400--Sobic007G141500 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic003G286600 Sobic003G286600 Sobic004G071650--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic005G103650 Sobic005G103650 Sobic001G471300--Sobic005G103650 Sobic003G148300 Sobic003G148300 Sobic001G471300--Sobic003G148300 Sobic001G471300--Sobic006G068300 Sobic001G363400 Sobic001G363400 Sobic001G471300--Sobic001G363400 Sobic005G013500 Sobic005G013500 Sobic001G471300--Sobic005G013500 Sobic004G352000 Sobic004G352000 Sobic001G471300--Sobic004G352000 Sobic007G058400 Sobic007G058400 Sobic001G471300--Sobic007G058400 Sobic001G187500 Sobic001G187500 Sobic001G471300--Sobic001G187500 Sobic001G330200 Sobic001G330200 Sobic001G471300--Sobic001G330200 Sobic009G079925 Sobic009G079925 Sobic008G076300--Sobic009G079925 Sobic009G021900 Sobic009G021900 Sobic008G076300--Sobic009G021900 Sobic008G076300--Sobic010G176101 Sobic002G109800 Sobic002G109800 Sobic008G076300--Sobic002G109800 Sobic005G011200 Sobic005G011200 Sobic001G333400--Sobic005G011200 Sobic010G052700 Sobic010G052700 Sobic001G333400--Sobic010G052700 Sobic002G247600 Sobic002G247600 Sobic001G333400--Sobic002G247600 Sobic001G333400--Sobic007G141500 Sobic001G503100 Sobic001G503100 Sobic001G333400--Sobic001G503100 Sobic002G004900 Sobic002G004900 Sobic001G333400--Sobic002G004900 Sobic006G125100 Sobic006G125100 Sobic001G333400--Sobic006G125100 Sobic002G336700 Sobic002G336700 Sobic001G333400--Sobic002G336700 Sobic001G187200 Sobic001G187200 Sobic001G333400--Sobic001G187200 Sobic010G226400 Sobic010G226400 Sobic002G044800--Sobic010G226400 Sobic004G333150 Sobic004G333150 Sobic002G044800--Sobic004G333150 Sobic002G044800--Sobic004G240600 Sobic002G044800--Sobic009G021900 Sobic002G389301 Sobic002G389301 Sobic002G044800--Sobic002G389301 Sobic002G040900 Sobic002G040900 Sobic002G044800--Sobic002G040900 Sobic002G044800--Sobic009G196400 Sobic009G009700 Sobic009G009700 Sobic002G044800--Sobic009G009700 Sobic002G044800--Sobic003G087300 Sobic009G003400 Sobic009G003400 Sobic010G016250--Sobic009G003400 Sobic003G076001 Sobic003G076001 Sobic010G016250--Sobic003G076001 Sobic010G016250--Sobic001G471300 Sobic010G016250--Sobic006G068300 Sobic010G016250--Sobic002G109800 Sobic005G177500--Sobic006G068300 Sobic005G177500--Sobic009G196400 Sobic005G177500--Sobic010G176101 Sobic005G177500--Sobic001G025101 Sobic005G177500--Sobic001G462700 Sobic001G243400 Sobic001G243400 Sobic005G177500--Sobic001G243400 Sobic006G162100 Sobic006G162100 Sobic005G177500--Sobic006G162100 Sobic005G177500--Sobic001G025300 Sobic004G022900 Sobic004G022900 Sobic005G177500--Sobic004G022900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.