Gene annotation
Transcriptome id Sobic.001G471300.2
Synonym Sb01g044150
Functional annotation AIR12, putative, expressed
UniProt A0A1Z5SBD4
Pfam PF04526
Panther DB PTHR23130 PTHR23130:SF99
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47530 : Auxin-responsive family protein
RAP-DB (Rice) LOC_Os03g09880.1 : AIR12, putative, expressed
MaizeGDB (Corn) Zm00025a001231 , Zm00025a053184 , Zm00025a053183
Brachypodium -
Barley HORVU4Hr1G071370.1 , HORVU4Hr1G071330.1
Wheat TraesCS4B02G264900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G103650 - -
2 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
4 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
5 Sobic.005G013500 WRKY52, expressed -
6 Sobic.004G352000 cytochrome P450, putative, expressed -
7 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
8 Sobic.001G187500 cytochrome P450, putative, expressed -
9 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
10 Sobic.010G016250 - -
11 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
12 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
13 Sobic.004G294400 expansin precursor, putative, expressed -
14 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G176101 - -
16 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.009G151600 AP2 domain containing protein, expressed -
19 Sobic.010G212800 expressed protein -
20 Sobic.010G259300 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G471300 Sobic001G471300 Sobic005G103650 Sobic005G103650 Sobic001G471300--Sobic005G103650 Sobic003G148300 Sobic003G148300 Sobic001G471300--Sobic003G148300 Sobic006G068300 Sobic006G068300 Sobic001G471300--Sobic006G068300 Sobic001G363400 Sobic001G363400 Sobic001G471300--Sobic001G363400 Sobic005G013500 Sobic005G013500 Sobic001G471300--Sobic005G013500 Sobic004G352000 Sobic004G352000 Sobic001G471300--Sobic004G352000 Sobic007G058400 Sobic007G058400 Sobic001G471300--Sobic007G058400 Sobic001G187500 Sobic001G187500 Sobic001G471300--Sobic001G187500 Sobic001G330200 Sobic001G330200 Sobic001G471300--Sobic001G330200 Sobic004G294400 Sobic004G294400 Sobic005G103650--Sobic004G294400 Sobic005G103650--Sobic003G148300 Sobic001G258300 Sobic001G258300 Sobic005G103650--Sobic001G258300 Sobic004G108200 Sobic004G108200 Sobic005G103650--Sobic004G108200 Sobic009G144700 Sobic009G144700 Sobic005G103650--Sobic009G144700 Sobic005G103650--Sobic001G330200 Sobic001G330100 Sobic001G330100 Sobic005G103650--Sobic001G330100 Sobic005G103650--Sobic004G352000 Sobic007G017500 Sobic007G017500 Sobic005G103650--Sobic007G017500 Sobic003G148300--Sobic004G108200 Sobic004G004500 Sobic004G004500 Sobic003G148300--Sobic004G004500 Sobic004G086400 Sobic004G086400 Sobic003G148300--Sobic004G086400 Sobic003G148300--Sobic009G144700 Sobic003G148300--Sobic004G294400 Sobic001G256700 Sobic001G256700 Sobic003G148300--Sobic001G256700 Sobic003G148300--Sobic001G330100 Sobic002G339000 Sobic002G339000 Sobic003G148300--Sobic002G339000 Sobic010G212800 Sobic010G212800 Sobic003G148300--Sobic010G212800 Sobic001G025101 Sobic001G025101 Sobic006G068300--Sobic001G025101 Sobic010G176101 Sobic010G176101 Sobic006G068300--Sobic010G176101 Sobic009G196400 Sobic009G196400 Sobic006G068300--Sobic009G196400 Sobic001G025300 Sobic001G025300 Sobic006G068300--Sobic001G025300 Sobic002G416600 Sobic002G416600 Sobic006G068300--Sobic002G416600 Sobic004G071650 Sobic004G071650 Sobic006G068300--Sobic004G071650 Sobic001G462700 Sobic001G462700 Sobic006G068300--Sobic001G462700 Sobic005G177500 Sobic005G177500 Sobic006G068300--Sobic005G177500 Sobic003G117600 Sobic003G117600 Sobic006G068300--Sobic003G117600 Sobic002G184300 Sobic002G184300 Sobic001G363400--Sobic002G184300 Sobic001G363400--Sobic001G330200 Sobic001G363400--Sobic005G013500 Sobic009G032000 Sobic009G032000 Sobic001G363400--Sobic009G032000 Sobic001G363400--Sobic001G330100 Sobic002G358300 Sobic002G358300 Sobic001G363400--Sobic002G358300 Sobic001G363400--Sobic009G144700 Sobic001G330400 Sobic001G330400 Sobic001G363400--Sobic001G330400 Sobic004G246600 Sobic004G246600 Sobic001G363400--Sobic004G246600 Sobic004G229500 Sobic004G229500 Sobic005G013500--Sobic004G229500 Sobic009G183900 Sobic009G183900 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic005G013500--Sobic009G144700 Sobic004G097100 Sobic004G097100 Sobic005G013500--Sobic004G097100 Sobic005G013500--Sobic001G363400 Sobic005G013500--Sobic004G294400 Sobic005G013500--Sobic004G108200 Sobic003G370600 Sobic003G370600 Sobic004G352000--Sobic003G370600 Sobic004G352000--Sobic009G144700 Sobic004G219800 Sobic004G219800 Sobic004G352000--Sobic004G219800 Sobic004G352000--Sobic001G256700 Sobic004G352000--Sobic001G330100 Sobic002G388900 Sobic002G388900 Sobic004G352000--Sobic002G388900 Sobic004G352000--Sobic004G108200 Sobic004G352000--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G352000--Sobic008G187001 Sobic004G229400 Sobic004G229400 Sobic007G058400--Sobic004G229400 Sobic003G427800 Sobic003G427800 Sobic007G058400--Sobic003G427800 Sobic007G058400--Sobic007G017500 Sobic001G031700 Sobic001G031700 Sobic007G058400--Sobic001G031700 Sobic007G058400--Sobic004G229500 Sobic007G058400--Sobic005G013500 Sobic006G075400 Sobic006G075400 Sobic007G058400--Sobic006G075400 Sobic009G205500 Sobic009G205500 Sobic007G058400--Sobic009G205500 Sobic002G351300 Sobic002G351300 Sobic007G058400--Sobic002G351300 Sobic001G187400 Sobic001G187400 Sobic001G187500--Sobic001G187400 Sobic002G369301 Sobic002G369301 Sobic001G187500--Sobic002G369301 Sobic001G187500--Sobic003G148300 Sobic001G187500--Sobic003G370600 Sobic002G245200 Sobic002G245200 Sobic001G187500--Sobic002G245200 Sobic008G102900 Sobic008G102900 Sobic001G187500--Sobic008G102900 Sobic001G187500--Sobic004G004500 Sobic001G187500--Sobic004G086400 Sobic002G388800 Sobic002G388800 Sobic001G187500--Sobic002G388800 Sobic001G330200--Sobic001G330100 Sobic001G330200--Sobic009G144700 Sobic001G330200--Sobic001G363400 Sobic001G330200--Sobic001G330400 Sobic001G330200--Sobic002G388900 Sobic001G330200--Sobic004G294400 Sobic002G395300 Sobic002G395300 Sobic001G330200--Sobic002G395300 Sobic001G330200--Sobic004G219800 Sobic001G330200--Sobic009G032000
Octagon: transcription factors


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