Gene annotation
Transcriptome id Sobic.002G360100.1
Synonym CZF2, ZAT6, C2H2, Sb02g038070
Functional annotation ZOS3-12 - C2H2 zinc finger protein, expressed
UniProt C5XD49
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF178
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67450 : zinc-finger protein 1
RAP-DB (Rice) LOC_Os03g32220.1 : ZOS3-11 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a048605 , Zm00025a052218
Brachypodium KQK09637
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.004G159733 - -
3 Sobic.003G300800 GA inactivating enzyme(PubMedID : 24151305)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulation in phyB-1 mutant(PubMedID : 26893475)@Expressed in older stem(PubMedID : 28649278)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
4 Sobic.002G335200 expressed protein -
5 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.001G258300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
9 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
10 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
11 Sobic.003G073380 - -
12 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
13 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
14 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.010G259300 transferase family protein, putative, expressed -
16 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
17 Sobic.001G471200 membrane protein, putative, expressed -
18 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G471300 AIR12, putative, expressed -
20 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -


Gene co-expression network
sample Sobic002G360100 Sobic002G360100 Sobic003G050300 Sobic003G050300 Sobic002G360100--Sobic003G050300 Sobic004G159733 Sobic004G159733 Sobic002G360100--Sobic004G159733 Sobic003G300800 Sobic003G300800 Sobic002G360100--Sobic003G300800 Sobic002G335200 Sobic002G335200 Sobic002G360100--Sobic002G335200 Sobic002G243000 Sobic002G243000 Sobic002G360100--Sobic002G243000 Sobic001G258300 Sobic001G258300 Sobic002G360100--Sobic001G258300 Sobic002G140300 Sobic002G140300 Sobic002G360100--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G360100--Sobic006G183400 Sobic006G217100 Sobic006G217100 Sobic002G360100--Sobic006G217100 Sobic003G073380 Sobic003G073380 Sobic003G050300--Sobic003G073380 Sobic001G247300 Sobic001G247300 Sobic003G050300--Sobic001G247300 Sobic003G268600 Sobic003G268600 Sobic003G050300--Sobic003G268600 Sobic003G043600 Sobic003G043600 Sobic003G050300--Sobic003G043600 Sobic001G267600 Sobic001G267600 Sobic003G050300--Sobic001G267600 Sobic003G093000 Sobic003G093000 Sobic003G050300--Sobic003G093000 Sobic009G145500 Sobic009G145500 Sobic003G050300--Sobic009G145500 Sobic003G050300--Sobic006G183400 Sobic003G442100 Sobic003G442100 Sobic003G050300--Sobic003G442100 Sobic005G018700 Sobic005G018700 Sobic004G159733--Sobic005G018700 Sobic010G270500 Sobic010G270500 Sobic004G159733--Sobic010G270500 Sobic007G151300 Sobic007G151300 Sobic004G159733--Sobic007G151300 Sobic001G050100 Sobic001G050100 Sobic004G159733--Sobic001G050100 Sobic002G336700 Sobic002G336700 Sobic004G159733--Sobic002G336700 Sobic010G185000 Sobic010G185000 Sobic004G159733--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic004G159733--Sobic006G103000 Sobic003G007600 Sobic003G007600 Sobic004G159733--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic004G159733--Sobic003G299300 Sobic006G179500 Sobic006G179500 Sobic003G300800--Sobic006G179500 Sobic003G300800--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic003G300800--Sobic002G359300 Sobic003G300800--Sobic006G183400 Sobic009G036100 Sobic009G036100 Sobic003G300800--Sobic009G036100 Sobic008G177800 Sobic008G177800 Sobic003G300800--Sobic008G177800 Sobic001G040200 Sobic001G040200 Sobic003G300800--Sobic001G040200 Sobic010G178500 Sobic010G178500 Sobic003G300800--Sobic010G178500 Sobic002G294700 Sobic002G294700 Sobic003G300800--Sobic002G294700 Sobic001G441100 Sobic001G441100 Sobic002G335200--Sobic001G441100 Sobic002G278500 Sobic002G278500 Sobic002G335200--Sobic002G278500 Sobic001G341600 Sobic001G341600 Sobic002G335200--Sobic001G341600 Sobic009G217600 Sobic009G217600 Sobic002G335200--Sobic009G217600 Sobic007G126300 Sobic007G126300 Sobic002G335200--Sobic007G126300 Sobic001G035000 Sobic001G035000 Sobic002G335200--Sobic001G035000 Sobic002G335200--Sobic002G140300 Sobic003G338900 Sobic003G338900 Sobic002G335200--Sobic003G338900 Sobic004G319700 Sobic004G319700 Sobic002G335200--Sobic004G319700 Sobic006G240600 Sobic006G240600 Sobic002G243000--Sobic006G240600 Sobic002G243000--Sobic003G050300 Sobic002G243000--Sobic009G145500 Sobic008G027600 Sobic008G027600 Sobic002G243000--Sobic008G027600 Sobic004G161751 Sobic004G161751 Sobic002G243000--Sobic004G161751 Sobic002G243000--Sobic003G073380 Sobic001G449100 Sobic001G449100 Sobic002G243000--Sobic001G449100 Sobic002G369400 Sobic002G369400 Sobic002G243000--Sobic002G369400 Sobic001G401100 Sobic001G401100 Sobic002G243000--Sobic001G401100 Sobic001G258300--Sobic009G036100 Sobic004G237800 Sobic004G237800 Sobic001G258300--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic001G258300--Sobic007G074000 Sobic009G200700 Sobic009G200700 Sobic001G258300--Sobic009G200700 Sobic002G189100 Sobic002G189100 Sobic001G258300--Sobic002G189100 Sobic001G258300--Sobic002G140300 Sobic001G407800 Sobic001G407800 Sobic001G258300--Sobic001G407800 Sobic009G151600 Sobic009G151600 Sobic001G258300--Sobic009G151600 Sobic006G231200 Sobic006G231200 Sobic001G258300--Sobic006G231200 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic006G183400--Sobic006G179500 Sobic006G183400--Sobic002G140300 Sobic005G196800 Sobic005G196800 Sobic006G183400--Sobic005G196800 Sobic006G183400--Sobic001G247300 Sobic006G183400--Sobic004G222500 Sobic003G037800 Sobic003G037800 Sobic006G183400--Sobic003G037800 Sobic006G183400--Sobic009G247900 Sobic006G183400--Sobic002G359300 Sobic003G264500 Sobic003G264500 Sobic006G183400--Sobic003G264500 Sobic001G242000 Sobic001G242000 Sobic006G217100--Sobic001G242000 Sobic002G063800 Sobic002G063800 Sobic006G217100--Sobic002G063800 Sobic002G351300 Sobic002G351300 Sobic006G217100--Sobic002G351300 Sobic001G330300 Sobic001G330300 Sobic006G217100--Sobic001G330300 Sobic004G064500 Sobic004G064500 Sobic006G217100--Sobic004G064500 Sobic006G050800 Sobic006G050800 Sobic006G217100--Sobic006G050800 Sobic004G141100 Sobic004G141100 Sobic006G217100--Sobic004G141100 Sobic003G269000 Sobic003G269000 Sobic006G217100--Sobic003G269000 Sobic006G217100--Sobic002G243000
Octagon: transcription factors


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