Gene annotation
Transcriptome id Sobic.001G258300.1
Synonym Sb01g023210
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1Z5S7R7
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF166
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G28590 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os10g25400.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a022857 , Zm00025a017868 , Zm00025a049955 , Zm00025a024419 , Zm00025a043630
Brachypodium PNT70453 , KQK04208
Barley HORVU1Hr1G019530.11 , HORVU1Hr1G019530.12 , HORVU6Hr1G009850.2 , HORVU7Hr1G025320.1 , HORVU1Hr1G019530.5 , HORVU1Hr1G019530.4 , HORVU1Hr1G019530.7 , HORVU1Hr1G019530.6 , HORVU1Hr1G019530.1 , HORVU1Hr1G019530.3 , HORVU1Hr1G019530.2 , HORVU1Hr1G019530.9 , HORVU1Hr1G019530.8
Wheat TraesCS7B02G233800 , TraesCS6A02G051500 , TraesCSU02G110500 , TraesCS6A02G277200 , TraesCS1B02G108400 , TraesCS6D02G257800 , TraesCS6D02G257800 , TraesCS6B02G068700 , TraesCS1D02G090800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
2 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
3 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
4 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
5 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
6 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
8 Sobic.009G151600 AP2 domain containing protein, expressed -
9 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
10 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
11 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
12 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
13 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
14 Sobic.003G369100 AP2 domain containing protein, expressed -
15 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
16 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
17 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
18 Sobic.010G259300 transferase family protein, putative, expressed -
19 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
20 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase


Gene co-expression network
sample Sobic001G258300 Sobic001G258300 Sobic009G036100 Sobic009G036100 Sobic001G258300--Sobic009G036100 Sobic004G237800 Sobic004G237800 Sobic001G258300--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic001G258300--Sobic007G074000 Sobic009G200700 Sobic009G200700 Sobic001G258300--Sobic009G200700 Sobic002G189100 Sobic002G189100 Sobic001G258300--Sobic002G189100 Sobic002G140300 Sobic002G140300 Sobic001G258300--Sobic002G140300 Sobic001G407800 Sobic001G407800 Sobic001G258300--Sobic001G407800 Sobic009G151600 Sobic009G151600 Sobic001G258300--Sobic009G151600 Sobic006G231200 Sobic006G231200 Sobic001G258300--Sobic006G231200 Sobic009G036000 Sobic009G036000 Sobic009G036100--Sobic009G036000 Sobic009G036100--Sobic007G074000 Sobic001G320900 Sobic001G320900 Sobic009G036100--Sobic001G320900 Sobic009G036100--Sobic001G407800 Sobic009G247900 Sobic009G247900 Sobic009G036100--Sobic009G247900 Sobic009G036100--Sobic002G140300 Sobic003G369100 Sobic003G369100 Sobic009G036100--Sobic003G369100 Sobic003G324400 Sobic003G324400 Sobic009G036100--Sobic003G324400 Sobic009G036100--Sobic001G258300 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic004G237800--Sobic002G055700 Sobic002G140400 Sobic002G140400 Sobic004G237800--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic007G074000--Sobic003G369100 Sobic004G141200 Sobic004G141200 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic003G228900 Sobic003G228900 Sobic007G074000--Sobic003G228900 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic007G074000--Sobic009G247900 Sobic009G200700--Sobic002G140300 Sobic009G200700--Sobic009G036100 Sobic009G200700--Sobic003G324400 Sobic002G356101 Sobic002G356101 Sobic009G200700--Sobic002G356101 Sobic006G165100 Sobic006G165100 Sobic009G200700--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic009G200700--Sobic001G040200 Sobic009G129000 Sobic009G129000 Sobic009G200700--Sobic009G129000 Sobic006G230500 Sobic006G230500 Sobic009G200700--Sobic006G230500 Sobic009G200700--Sobic001G258300 Sobic002G189100--Sobic003G228900 Sobic003G093000 Sobic003G093000 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic010G209200 Sobic010G209200 Sobic002G189100--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic002G189100--Sobic002G220000 Sobic004G191400 Sobic004G191400 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic006G179500 Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic002G140300--Sobic009G247900 Sobic002G333400 Sobic002G333400 Sobic001G407800--Sobic002G333400 Sobic001G407800--Sobic009G036100 Sobic006G056400 Sobic006G056400 Sobic001G407800--Sobic006G056400 Sobic001G407800--Sobic004G237800 Sobic001G407800--Sobic007G074000 Sobic005G186100 Sobic005G186100 Sobic001G407800--Sobic005G186100 Sobic010G259300 Sobic010G259300 Sobic001G407800--Sobic010G259300 Sobic001G407800--Sobic003G369100 Sobic008G139600 Sobic008G139600 Sobic001G407800--Sobic008G139600 Sobic005G099000 Sobic005G099000 Sobic009G151600--Sobic005G099000 Sobic009G151600--Sobic005G063100 Sobic009G151600--Sobic002G336600 Sobic001G481100 Sobic001G481100 Sobic009G151600--Sobic001G481100 Sobic009G151600--Sobic003G369100 Sobic009G151600--Sobic002G333400 Sobic009G151600--Sobic004G237800 Sobic003G303100 Sobic003G303100 Sobic009G151600--Sobic003G303100 Sobic009G151600--Sobic007G074000 Sobic006G230900 Sobic006G230900 Sobic006G231200--Sobic006G230900 Sobic006G231100 Sobic006G231100 Sobic006G231200--Sobic006G231100 Sobic007G213800 Sobic007G213800 Sobic006G231200--Sobic007G213800 Sobic001G459800 Sobic001G459800 Sobic006G231200--Sobic001G459800 Sobic010G217800 Sobic010G217800 Sobic006G231200--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G231200--Sobic003G144700 Sobic006G267200 Sobic006G267200 Sobic006G231200--Sobic006G267200 Sobic002G282300 Sobic002G282300 Sobic006G231200--Sobic002G282300 Sobic006G231200--Sobic001G320900
Octagon: transcription factors


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