Gene annotation
Transcriptome id Sobic.003G279500.2
Synonym 1, ATSERAT1, SERAT1, Sb03g033120, SAT-52, SAT5
Functional annotation serine acetyltransferase 1 (PubMedID : 26465154)
serine acetyltransferase protein, putative, expressed
UniProt A0A1W0VZ63
Pfam PF14602 PF00132 PF06426
Panther DB PTHR23416 PTHR23416:SF67
NCBI CDD KOG4750; Serine O-acetyltransferase
KEGG Orthology K00640; serine O-acetyltransferase
Gene Ontology GO:0009001; serine O-acetyltransferase activity GO:0006535cysteine biosynthetic process from serine GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT5G56760 : serine acetyltransferase 1;1
RAP-DB (Rice) LOC_Os01g52260.1 : serine acetyltransferase protein, putative, expressed
MaizeGDB (Corn) Zm00025a038985 , Zm00025a044250
Brachypodium KQK05228
Barley HORVU0Hr1G022440.1 , HORVU0Hr1G035820.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G279500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
2 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
3 Sobic.001G138600 VQ domain containing protein, putative, expressed -
4 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
5 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
9 Sobic.003G369100 AP2 domain containing protein, expressed -
10 Sobic.010G209200 WRKY28, expressed -
11 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
14 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
15 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
16 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
17 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
18 Sobic.009G122400 expressed protein -
19 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
20 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase


Gene co-expression network
sample Sobic003G279500 Sobic003G279500 Sobic007G074000 Sobic007G074000 Sobic003G279500--Sobic007G074000 Sobic003G228900 Sobic003G228900 Sobic003G279500--Sobic003G228900 Sobic001G138600 Sobic001G138600 Sobic003G279500--Sobic001G138600 Sobic007G169700 Sobic007G169700 Sobic003G279500--Sobic007G169700 Sobic009G184000 Sobic009G184000 Sobic003G279500--Sobic009G184000 Sobic004G237800 Sobic004G237800 Sobic003G279500--Sobic004G237800 Sobic001G112200 Sobic001G112200 Sobic003G279500--Sobic001G112200 Sobic004G141200 Sobic004G141200 Sobic003G279500--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G279500--Sobic003G369100 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic002G140400 Sobic002G140400 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic002G336600 Sobic002G336600 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic003G382800 Sobic003G382800 Sobic001G138600--Sobic003G382800 Sobic001G138600--Sobic001G112200 Sobic001G138600--Sobic004G141200 Sobic001G138600--Sobic003G369100 Sobic001G138600--Sobic009G184000 Sobic001G138600--Sobic001G079300 Sobic001G138600--Sobic007G074000 Sobic001G459800 Sobic001G459800 Sobic001G138600--Sobic001G459800 Sobic001G391500 Sobic001G391500 Sobic001G138600--Sobic001G391500 Sobic007G169700--Sobic009G184000 Sobic007G169700--Sobic001G112200 Sobic008G066401 Sobic008G066401 Sobic007G169700--Sobic008G066401 Sobic007G169700--Sobic003G432700 Sobic009G145700 Sobic009G145700 Sobic007G169700--Sobic009G145700 Sobic007G169700--Sobic001G138600 Sobic001G318700 Sobic001G318700 Sobic007G169700--Sobic001G318700 Sobic003G043500 Sobic003G043500 Sobic007G169700--Sobic003G043500 Sobic006G235100 Sobic006G235100 Sobic007G169700--Sobic006G235100 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic001G112200--Sobic009G184000 Sobic001G112200--Sobic001G318700 Sobic001G112200--Sobic001G138600 Sobic001G112200--Sobic003G369100 Sobic001G112200--Sobic007G169700 Sobic001G112200--Sobic004G237800 Sobic001G112200--Sobic009G145700 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic004G141200--Sobic003G369100 Sobic001G108200 Sobic001G108200 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic003G393900 Sobic003G393900 Sobic004G141200--Sobic003G393900 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic004G141200--Sobic001G138600 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic003G369100--Sobic001G112200 Sobic003G345100 Sobic003G345100 Sobic003G369100--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300
Octagon: transcription factors


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