Gene annotation
Transcriptome id Sobic.002G254000.5,Sobic.002G254000.2,Sobic.002G254000.3,Sobic.002G254000.4,Sobic.002G254000.1
Synonym
Functional annotation expressed protein
UniProt A0A1W0W5P4 , A0A1B6QDF8
Pfam PF13857 PF00023
Panther DB PTHR24136 PTHR24136:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g33200.1 : expressed protein
MaizeGDB (Corn) Zm00025a034526
Brachypodium PNT63847 , PNT63846 , PNT63849 , PNT63848 , PNT63850 , KQJ88848 , KQJ88849 , KQJ88847
Barley HORVU4Hr1G005480.1 , HORVU1Hr1G008490.4 , HORVU1Hr1G008490.5 , HORVU1Hr1G008490.1 , HORVU4Hr1G005370.4 , HORVU4Hr1G005370.3 , HORVU4Hr1G005370.1 , HORVU4Hr1G008330.1 , HORVU4Hr1G008330.2 , HORVU4Hr1G008330.3 , HORVU1Hr1G008490.3 , HORVU6Hr1G076640.2 , HORVU6Hr1G076640.1 , HORVU1Hr1G058660.1
Wheat TraesCS4B02G034600 , TraesCS4B02G033700 , TraesCS1A02G044000 , TraesCS2A02G211700 , TraesCS4A02G264200 , TraesCS6D02G290200 , TraesCS6D02G290200 , TraesCS6D02G290200 , TraesCS6D02G290200 , TraesCS6D02G290200 , TraesCS2A02G211700 , TraesCS2A02G211700 , TraesCS2A02G211700 , TraesCS2A02G211700 , TraesCS4A02G264300 , TraesCS4B02G050700 , TraesCS4B02G050700 , TraesCS4B02G050700 , TraesCS4A02G278300 , TraesCS4A02G278300 , TraesCS4A02G278300 , TraesCS4A02G278300 , TraesCS6A02G310900 , TraesCS4D02G033000 , TraesCS4D02G033000 , TraesCS4A02G279000 , TraesCS1D02G231900 , TraesCS4D02G032300 , TraesCS4D02G032300 , TraesCS1B02G056800 , TraesCS2A02G211600 , TraesCS4D02G050900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G403833 - -
2 Sobic.002G403966 - -
3 Sobic.007G039500 aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.006G053900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.004G094900 expressed protein -
6 Sobic.001G197300 kinase, putative, expressed -
7 Sobic.008G112900 OsFBX452 - F-box domain containing protein, expressed -
8 Sobic.001G187400 cytochrome P450, putative, expressed -
9 Sobic.001G381400 expressed protein -
10 Sobic.003G211400 OsFBX313 - F-box domain containing protein, expressed -
11 Sobic.007G100032 - -
12 Sobic.002G390000 dirigent, putative, expressed -
13 Sobic.003G076001 - -
14 Sobic.004G251800 leaf senescence related protein, putative, expressed -
15 Sobic.005G171001 - -
16 Sobic.006G063400 proteasome subunit, putative, expressed -
17 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.004G135000 - -
19 Sobic.009G003400 expressed protein -
20 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic002G254000 Sobic002G254000 Sobic002G403833 Sobic002G403833 Sobic002G254000--Sobic002G403833 Sobic002G403966 Sobic002G403966 Sobic002G254000--Sobic002G403966 Sobic007G039500 Sobic007G039500 Sobic002G254000--Sobic007G039500 Sobic006G053900 Sobic006G053900 Sobic002G254000--Sobic006G053900 Sobic004G094900 Sobic004G094900 Sobic002G254000--Sobic004G094900 Sobic001G197300 Sobic001G197300 Sobic002G254000--Sobic001G197300 Sobic008G112900 Sobic008G112900 Sobic002G254000--Sobic008G112900 Sobic001G187400 Sobic001G187400 Sobic002G254000--Sobic001G187400 Sobic001G381400 Sobic001G381400 Sobic002G254000--Sobic001G381400 Sobic002G403833--Sobic002G403966 Sobic002G403833--Sobic007G039500 Sobic002G403833--Sobic002G254000 Sobic002G403833--Sobic006G053900 Sobic002G403833--Sobic004G094900 Sobic002G403833--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G403833--Sobic002G390000 Sobic005G171001 Sobic005G171001 Sobic002G403833--Sobic005G171001 Sobic002G403833--Sobic001G187400 Sobic002G403966--Sobic002G403833 Sobic002G403966--Sobic002G254000 Sobic002G403966--Sobic007G039500 Sobic002G403966--Sobic004G094900 Sobic002G403966--Sobic006G053900 Sobic002G403966--Sobic001G381400 Sobic002G403966--Sobic002G390000 Sobic002G403966--Sobic008G112900 Sobic002G403966--Sobic005G171001 Sobic007G039500--Sobic006G053900 Sobic007G039500--Sobic002G403833 Sobic007G039500--Sobic004G094900 Sobic007G039500--Sobic002G254000 Sobic007G039500--Sobic002G403966 Sobic007G039500--Sobic001G187400 Sobic007G039500--Sobic002G390000 Sobic007G039500--Sobic001G381400 Sobic007G039500--Sobic005G171001 Sobic006G053900--Sobic007G039500 Sobic006G053900--Sobic002G403833 Sobic006G053900--Sobic004G094900 Sobic006G053900--Sobic002G390000 Sobic006G053900--Sobic002G403966 Sobic006G053900--Sobic001G381400 Sobic006G053900--Sobic001G187400 Sobic006G053900--Sobic002G254000 Sobic006G053900--Sobic005G171001 Sobic004G094900--Sobic001G381400 Sobic004G094900--Sobic002G390000 Sobic007G100032 Sobic007G100032 Sobic004G094900--Sobic007G100032 Sobic008G079500 Sobic008G079500 Sobic004G094900--Sobic008G079500 Sobic002G090100 Sobic002G090100 Sobic004G094900--Sobic002G090100 Sobic010G136400 Sobic010G136400 Sobic001G197300--Sobic010G136400 Sobic001G197300--Sobic007G100032 Sobic006G063400 Sobic006G063400 Sobic001G197300--Sobic006G063400 Sobic007G101900 Sobic007G101900 Sobic001G197300--Sobic007G101900 Sobic001G197300--Sobic004G094900 Sobic008G104100 Sobic008G104100 Sobic001G197300--Sobic008G104100 Sobic001G065900 Sobic001G065900 Sobic001G197300--Sobic001G065900 Sobic004G135000 Sobic004G135000 Sobic001G197300--Sobic004G135000 Sobic001G197300--Sobic001G381400 Sobic008G112900--Sobic004G135000 Sobic008G112900--Sobic001G197300 Sobic008G112900--Sobic007G100032 Sobic008G112900--Sobic004G094900 Sobic008G112900--Sobic002G403966 Sobic008G112900--Sobic001G065900 Sobic008G112900--Sobic006G063400 Sobic008G112900--Sobic001G381400 Sobic008G112900--Sobic010G136400 Sobic001G187500 Sobic001G187500 Sobic001G187400--Sobic001G187500 Sobic002G369301 Sobic002G369301 Sobic001G187400--Sobic002G369301 Sobic003G370600 Sobic003G370600 Sobic001G187400--Sobic003G370600 Sobic002G388800 Sobic002G388800 Sobic001G187400--Sobic002G388800 Sobic004G092800 Sobic004G092800 Sobic001G187400--Sobic004G092800 Sobic001G232500 Sobic001G232500 Sobic001G187400--Sobic001G232500 Sobic001G187400--Sobic007G039500 Sobic006G170000 Sobic006G170000 Sobic001G187400--Sobic006G170000 Sobic009G123733 Sobic009G123733 Sobic001G187400--Sobic009G123733 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic001G381400--Sobic002G390000 Sobic007G159100 Sobic007G159100 Sobic001G381400--Sobic007G159100
Octagon: transcription factors


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