Gene annotation
Transcriptome id Sobic.009G003400.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6P5Z2
Pfam PF00161
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017148; negative regulation of translation


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g03900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G076001 - -
2 Sobic.010G016250 - -
3 Sobic.003G211400 OsFBX313 - F-box domain containing protein, expressed -
4 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
10 Sobic.009G220250 - -
11 Sobic.007G039500 aquaporin protein, putative, expressed K09874: aquaporin NIP
12 Sobic.007G106050 - -
13 Sobic.001G297966 - -
14 Sobic.006G053900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
15 Sobic.002G254000 expressed protein -
16 Sobic.008G076300 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
17 Sobic.008G184600 expressed protein -
18 Sobic.001G471300 AIR12, putative, expressed -
19 Sobic.001G123900 glucosyltransferase, putative, expressed -
20 Sobic.010G176101 - -


Gene co-expression network
sample Sobic009G003400 Sobic009G003400 Sobic003G076001 Sobic003G076001 Sobic009G003400--Sobic003G076001 Sobic010G016250 Sobic010G016250 Sobic009G003400--Sobic010G016250 Sobic003G211400 Sobic003G211400 Sobic009G003400--Sobic003G211400 Sobic002G109800 Sobic002G109800 Sobic009G003400--Sobic002G109800 Sobic003G076001--Sobic009G003400 Sobic003G076001--Sobic003G211400 Sobic003G076001--Sobic010G016250 Sobic007G039500 Sobic007G039500 Sobic003G076001--Sobic007G039500 Sobic006G053900 Sobic006G053900 Sobic003G076001--Sobic006G053900 Sobic002G254000 Sobic002G254000 Sobic003G076001--Sobic002G254000 Sobic002G403833 Sobic002G403833 Sobic003G076001--Sobic002G403833 Sobic003G076001--Sobic002G109800 Sobic010G016250--Sobic009G003400 Sobic010G016250--Sobic003G076001 Sobic001G471300 Sobic001G471300 Sobic010G016250--Sobic001G471300 Sobic006G068300 Sobic006G068300 Sobic010G016250--Sobic006G068300 Sobic010G016250--Sobic002G109800 Sobic008G029400 Sobic008G029400 Sobic003G211400--Sobic008G029400 Sobic003G211400--Sobic009G003400 Sobic001G260000 Sobic001G260000 Sobic003G211400--Sobic001G260000 Sobic003G211400--Sobic003G076001 Sobic003G211400--Sobic007G039500 Sobic005G203750 Sobic005G203750 Sobic003G211400--Sobic005G203750 Sobic001G331301 Sobic001G331301 Sobic003G211400--Sobic001G331301 Sobic004G071650 Sobic004G071650 Sobic003G211400--Sobic004G071650 Sobic003G211400--Sobic002G254000 Sobic002G109800--Sobic002G109800 Sobic007G106050 Sobic007G106050 Sobic002G109800--Sobic007G106050 Sobic001G297966 Sobic001G297966 Sobic002G109800--Sobic001G297966 Sobic009G220250 Sobic009G220250 Sobic002G109800--Sobic009G220250 Sobic008G184600 Sobic008G184600 Sobic002G109800--Sobic008G184600
Octagon: transcription factors


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