Gene annotation
Transcriptome id Sobic.008G184600.1
Synonym Sb08g022630
Functional annotation expressed protein
UniProt C5YSW9
Pfam PF14543
Panther DB PTHR13683 PTHR13683:SF304
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g20110.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.007G106050 - -
8 Sobic.001G297966 - -
9 Sobic.009G220250 - -
10 Sobic.001G123900 glucosyltransferase, putative, expressed -
11 Sobic.009G003400 expressed protein -
12 Sobic.010G016250 - -
13 Sobic.008G076300 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
14 Sobic.005G194500 vacuolar protein sorting-associated protein 26, putative, expressed -
15 Sobic.009G032533 - -
16 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.003G076001 - -
18 Sobic.010G259233 - -
19 Sobic.009G079925 - -
20 Sobic.001G062800 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G184600 Sobic008G184600 Sobic002G109800 Sobic002G109800 Sobic008G184600--Sobic002G109800 Sobic007G106050 Sobic007G106050 Sobic008G184600--Sobic007G106050 Sobic001G297966 Sobic001G297966 Sobic008G184600--Sobic001G297966 Sobic009G220250 Sobic009G220250 Sobic008G184600--Sobic009G220250 Sobic002G109800--Sobic002G109800 Sobic002G109800--Sobic007G106050 Sobic002G109800--Sobic001G297966 Sobic002G109800--Sobic009G220250 Sobic002G109800--Sobic008G184600 Sobic007G106050--Sobic002G109800 Sobic007G106050--Sobic001G297966 Sobic007G106050--Sobic009G220250 Sobic007G106050--Sobic008G184600 Sobic001G297966--Sobic002G109800 Sobic001G297966--Sobic007G106050 Sobic001G297966--Sobic009G220250 Sobic001G297966--Sobic008G184600 Sobic009G220250--Sobic002G109800 Sobic009G220250--Sobic007G106050 Sobic009G220250--Sobic001G297966 Sobic009G220250--Sobic008G184600
Octagon: transcription factors


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