Gene annotation
Transcriptome id Sobic.005G194500.2
Synonym Sb05g025140, VPS26A
Functional annotation vacuolar protein sorting-associated protein 26, putative, expressed
UniProt A0A1Z5RJW9
Pfam PF03643
Panther DB PTHR12233 PTHR12233:SF6
NCBI CDD KOG2717; Uncharacterized conserved protein with similarity to embryogenesis protein H beta 58 and VPS26
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53530 : vacuolar protein sorting 26A
RAP-DB (Rice) LOC_Os11g41130.2 : vacuolar protein sorting-associated protein 26, putative, expressed
MaizeGDB (Corn) Zm00025a015608
Brachypodium KQJ87689 , KQJ87690
Barley HORVU4Hr1G031010.5 , HORVU4Hr1G031010.4 , HORVU4Hr1G031010.7 , HORVU4Hr1G031010.6 , HORVU4Hr1G031010.1 , HORVU4Hr1G031010.3 , HORVU4Hr1G031010.2
Wheat TraesCS4D02G148600 , TraesCS4A02G164600 , TraesCS4A02G164600 , TraesCS4D02G148600 , TraesCSU02G067300
Populus PNT30430 , PNT30431 , PNT30432 , PNT30433


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.007G106050 - -
8 Sobic.007G162901 - -
9 Sobic.001G297966 - -
10 Sobic.009G220250 - -
11 Sobic.008G184600 expressed protein -
12 Sobic.001G123900 glucosyltransferase, putative, expressed -
13 Sobic.009G003400 expressed protein -
14 Sobic.010G016250 - -
15 Sobic.006G206500 60S ribosomal protein L7, putative, expressed -
16 Sobic.008G076300 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
17 Sobic.009G032533 - -
18 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
19 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
20 Sobic.003G076001 - -


Gene co-expression network
sample Sobic005G194500 Sobic005G194500 Sobic002G109800 Sobic002G109800 Sobic005G194500--Sobic002G109800 Sobic007G106050 Sobic007G106050 Sobic005G194500--Sobic007G106050 Sobic007G162901 Sobic007G162901 Sobic005G194500--Sobic007G162901 Sobic001G297966 Sobic001G297966 Sobic005G194500--Sobic001G297966 Sobic002G109800--Sobic002G109800 Sobic002G109800--Sobic007G106050 Sobic002G109800--Sobic001G297966 Sobic009G220250 Sobic009G220250 Sobic002G109800--Sobic009G220250 Sobic008G184600 Sobic008G184600 Sobic002G109800--Sobic008G184600 Sobic007G106050--Sobic002G109800 Sobic007G106050--Sobic001G297966 Sobic007G106050--Sobic009G220250 Sobic007G106050--Sobic008G184600 Sobic006G206500 Sobic006G206500 Sobic007G162901--Sobic006G206500 Sobic001G371600 Sobic001G371600 Sobic007G162901--Sobic001G371600 Sobic005G158901 Sobic005G158901 Sobic007G162901--Sobic005G158901 Sobic004G212350 Sobic004G212350 Sobic007G162901--Sobic004G212350 Sobic010G031400 Sobic010G031400 Sobic007G162901--Sobic010G031400 Sobic003G378700 Sobic003G378700 Sobic007G162901--Sobic003G378700 Sobic002G100000 Sobic002G100000 Sobic007G162901--Sobic002G100000 Sobic009G071600 Sobic009G071600 Sobic007G162901--Sobic009G071600 Sobic007G162901--Sobic005G194500 Sobic001G297966--Sobic002G109800 Sobic001G297966--Sobic007G106050 Sobic001G297966--Sobic009G220250 Sobic001G297966--Sobic008G184600
Octagon: transcription factors


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