Gene annotation
Transcriptome id Sobic.004G135000.4
Synonym
Functional annotation -
UniProt A0A194YPJ2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G112900 OsFBX452 - F-box domain containing protein, expressed -
2 Sobic.007G100032 - -
3 Sobic.001G327500 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
4 Sobic.008G079500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.004G165800 zinc finger family protein, putative, expressed -
6 Sobic.001G381400 expressed protein -
7 Sobic.001G197300 kinase, putative, expressed -
8 Sobic.004G094900 expressed protein -
9 Sobic.002G090100 - -
10 Sobic.002G090100 - -
11 Sobic.002G090100 - -
12 Sobic.002G090100 - -
13 Sobic.002G090100 - -
14 Sobic.002G090100 - -
15 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
17 Sobic.002G390000 dirigent, putative, expressed -
18 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
19 Sobic.002G403966 - -
20 Sobic.007G101900 - -


Gene co-expression network
sample Sobic004G135000 Sobic004G135000 Sobic008G112900 Sobic008G112900 Sobic004G135000--Sobic008G112900 Sobic007G100032 Sobic007G100032 Sobic004G135000--Sobic007G100032 Sobic001G327500 Sobic001G327500 Sobic004G135000--Sobic001G327500 Sobic008G079500 Sobic008G079500 Sobic004G135000--Sobic008G079500 Sobic004G165800 Sobic004G165800 Sobic004G135000--Sobic004G165800 Sobic001G381400 Sobic001G381400 Sobic004G135000--Sobic001G381400 Sobic001G197300 Sobic001G197300 Sobic004G135000--Sobic001G197300 Sobic004G094900 Sobic004G094900 Sobic004G135000--Sobic004G094900 Sobic002G090100 Sobic002G090100 Sobic004G135000--Sobic002G090100 Sobic008G112900--Sobic004G135000 Sobic008G112900--Sobic001G197300 Sobic008G112900--Sobic007G100032 Sobic008G112900--Sobic004G094900 Sobic002G403966 Sobic002G403966 Sobic008G112900--Sobic002G403966 Sobic001G065900 Sobic001G065900 Sobic008G112900--Sobic001G065900 Sobic006G063400 Sobic006G063400 Sobic008G112900--Sobic006G063400 Sobic008G112900--Sobic001G381400 Sobic010G136400 Sobic010G136400 Sobic008G112900--Sobic010G136400 Sobic007G100032--Sobic001G197300 Sobic007G100032--Sobic004G094900 Sobic007G100032--Sobic010G136400 Sobic007G100032--Sobic001G381400 Sobic007G100032--Sobic001G065900 Sobic007G100032--Sobic006G063400 Sobic007G100032--Sobic008G079500 Sobic003G060100 Sobic003G060100 Sobic007G100032--Sobic003G060100 Sobic007G101900 Sobic007G101900 Sobic007G100032--Sobic007G101900 Sobic001G327500--Sobic004G165800 Sobic007G159100 Sobic007G159100 Sobic001G327500--Sobic007G159100 Sobic001G327500--Sobic001G381400 Sobic002G102132 Sobic002G102132 Sobic001G327500--Sobic002G102132 Sobic001G327500--Sobic002G090100 Sobic008G079500--Sobic001G381400 Sobic008G079500--Sobic002G090100 Sobic008G079500--Sobic007G159100 Sobic008G079500--Sobic004G094900 Sobic006G057500 Sobic006G057500 Sobic004G165800--Sobic006G057500 Sobic004G165800--Sobic007G159100 Sobic004G165800--Sobic001G065900 Sobic004G165800--Sobic002G102132 Sobic002G100832 Sobic002G100832 Sobic004G165800--Sobic002G100832 Sobic004G263100 Sobic004G263100 Sobic004G165800--Sobic004G263100 Sobic004G165800--Sobic001G327500 Sobic004G165800--Sobic001G381400 Sobic004G165800--Sobic002G090100 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic002G390000 Sobic002G390000 Sobic001G381400--Sobic002G390000 Sobic001G381400--Sobic007G159100 Sobic001G197300--Sobic010G136400 Sobic001G197300--Sobic007G100032 Sobic001G197300--Sobic006G063400 Sobic001G197300--Sobic007G101900 Sobic001G197300--Sobic004G094900 Sobic008G104100 Sobic008G104100 Sobic001G197300--Sobic008G104100 Sobic001G197300--Sobic001G065900 Sobic001G197300--Sobic004G135000 Sobic001G197300--Sobic001G381400 Sobic004G094900--Sobic001G381400 Sobic004G094900--Sobic002G390000 Sobic004G094900--Sobic007G100032 Sobic004G094900--Sobic008G079500 Sobic004G094900--Sobic002G090100 Sobic002G090100--Sobic002G090100 Sobic002G090100--Sobic001G381400 Sobic002G090100--Sobic007G159100 Sobic002G090100--Sobic002G102132 Sobic002G090100--Sobic004G263100
Octagon: transcription factors


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