Gene annotation
Transcriptome id Sobic.002G182500.2
Synonym Sb02g023060
Functional annotation nucleic acid binding protein, putative, expressed
UniProt A0A1W0W4U9
Pfam -
Panther DB PTHR22938 PTHR22938:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47090 : zinc ion binding;nucleic acid binding
RAP-DB (Rice) LOC_Os07g43830.1 : nucleic acid binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128400 O-methyltransferase, putative, expressed -
2 Sobic.001G342700 protein phosphotase protein, putative, expressed -
3 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
4 Sobic.002G182400 - -
5 Sobic.009G009400 expressed protein -
6 Sobic.005G169100 cytochrome P450, putative, expressed -
7 Sobic.006G036500 peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed -
8 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G260000 SAP domain containing protein, expressed -
10 Sobic.007G158700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@phospholipase A("PubMedID : 26759170,PubMedID : 24597475")@patatin, putative, expressed -
11 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.007G067350 - -
13 Sobic.001G343500 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
14 Sobic.001G320400 lysM domain containing protein, putative, expressed -
15 Sobic.002G146100 - -
16 Sobic.002G018500 - -
17 Sobic.008G054150 - -
18 Sobic.006G038800 purple acid phosphatase 27("PubMedID : 26759170,PubMedID : 24597475")@nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
19 Sobic.010G102300 expressed protein -
20 Sobic.007G135201 - -


Gene co-expression network
sample Sobic002G182500 Sobic002G182500 Sobic004G128400 Sobic004G128400 Sobic002G182500--Sobic004G128400 Sobic001G342700 Sobic001G342700 Sobic002G182500--Sobic001G342700 Sobic001G343601 Sobic001G343601 Sobic002G182500--Sobic001G343601 Sobic002G182400 Sobic002G182400 Sobic002G182500--Sobic002G182400 Sobic009G009400 Sobic009G009400 Sobic002G182500--Sobic009G009400 Sobic005G169100 Sobic005G169100 Sobic002G182500--Sobic005G169100 Sobic006G036500 Sobic006G036500 Sobic002G182500--Sobic006G036500 Sobic002G183100 Sobic002G183100 Sobic002G182500--Sobic002G183100 Sobic001G260000 Sobic001G260000 Sobic002G182500--Sobic001G260000 Sobic001G231600 Sobic001G231600 Sobic004G128400--Sobic001G231600 Sobic004G128400--Sobic002G182500 Sobic001G320400 Sobic001G320400 Sobic004G128400--Sobic001G320400 Sobic001G331301 Sobic001G331301 Sobic004G128400--Sobic001G331301 Sobic007G135201 Sobic007G135201 Sobic004G128400--Sobic007G135201 Sobic001G495164 Sobic001G495164 Sobic004G128400--Sobic001G495164 Sobic010G117900 Sobic010G117900 Sobic004G128400--Sobic010G117900 Sobic007G067600 Sobic007G067600 Sobic004G128400--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic004G128400--Sobic010G084700 Sobic007G067300 Sobic007G067300 Sobic001G342700--Sobic007G067300 Sobic001G342700--Sobic001G343601 Sobic001G342700--Sobic009G009400 Sobic001G342700--Sobic005G169100 Sobic002G146100 Sobic002G146100 Sobic001G342700--Sobic002G146100 Sobic006G033260 Sobic006G033260 Sobic001G342700--Sobic006G033260 Sobic001G342700--Sobic002G182500 Sobic008G068166 Sobic008G068166 Sobic001G342700--Sobic008G068166 Sobic008G054150 Sobic008G054150 Sobic001G342700--Sobic008G054150 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G343601--Sobic001G342700 Sobic001G343601--Sobic001G260000 Sobic007G169500 Sobic007G169500 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic004G115500 Sobic004G115500 Sobic001G343601--Sobic004G115500 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700 Sobic005G156600 Sobic005G156600 Sobic002G182400--Sobic005G156600 Sobic002G182400--Sobic002G182500 Sobic002G182400--Sobic004G128400 Sobic002G182400--Sobic005G169100 Sobic002G182400--Sobic001G342700 Sobic007G060300 Sobic007G060300 Sobic002G182400--Sobic007G060300 Sobic010G035700 Sobic010G035700 Sobic002G182400--Sobic010G035700 Sobic001G343500 Sobic001G343500 Sobic002G182400--Sobic001G343500 Sobic002G018500 Sobic002G018500 Sobic002G182400--Sobic002G018500 Sobic009G009400--Sobic001G343601 Sobic009G009400--Sobic007G169500 Sobic009G009400--Sobic008G054150 Sobic009G009400--Sobic001G342700 Sobic009G043700 Sobic009G043700 Sobic009G009400--Sobic009G043700 Sobic009G009400--Sobic004G115500 Sobic009G009400--Sobic001G260000 Sobic009G009400--Sobic002G146100 Sobic009G009400--Sobic002G182500 Sobic005G169100--Sobic007G067300 Sobic005G169100--Sobic001G342700 Sobic007G015800 Sobic007G015800 Sobic005G169100--Sobic007G015800 Sobic007G066908 Sobic007G066908 Sobic005G169100--Sobic007G066908 Sobic006G206900 Sobic006G206900 Sobic005G169100--Sobic006G206900 Sobic010G102300 Sobic010G102300 Sobic005G169100--Sobic010G102300 Sobic005G169100--Sobic002G182500 Sobic005G169100--Sobic010G035700 Sobic001G319700 Sobic001G319700 Sobic005G169100--Sobic001G319700 Sobic006G038800 Sobic006G038800 Sobic006G036500--Sobic006G038800 Sobic002G156900 Sobic002G156900 Sobic006G036500--Sobic002G156900 Sobic006G036500--Sobic002G182500 Sobic004G189301 Sobic004G189301 Sobic006G036500--Sobic004G189301 Sobic006G036500--Sobic002G183100 Sobic006G002100 Sobic006G002100 Sobic006G036500--Sobic006G002100 Sobic010G110266 Sobic010G110266 Sobic006G036500--Sobic010G110266 Sobic006G036500--Sobic002G018500 Sobic005G089500 Sobic005G089500 Sobic006G036500--Sobic005G089500 Sobic008G140300 Sobic008G140300 Sobic002G183100--Sobic008G140300 Sobic001G348700 Sobic001G348700 Sobic002G183100--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic002G183100--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G183100--Sobic007G067400 Sobic002G183100--Sobic010G084700 Sobic001G487300 Sobic001G487300 Sobic002G183100--Sobic001G487300 Sobic004G037000 Sobic004G037000 Sobic002G183100--Sobic004G037000 Sobic002G184200 Sobic002G184200 Sobic002G183100--Sobic002G184200 Sobic002G183100--Sobic002G182500 Sobic001G260000--Sobic008G054150 Sobic001G260000--Sobic001G343601 Sobic001G260000--Sobic007G169500 Sobic001G260000--Sobic009G009400 Sobic004G311750 Sobic004G311750 Sobic001G260000--Sobic004G311750 Sobic001G260000--Sobic004G115500 Sobic001G260000--Sobic002G146100 Sobic008G029400 Sobic008G029400 Sobic001G260000--Sobic008G029400 Sobic001G260000--Sobic002G182500
Octagon: transcription factors


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