Gene annotation
Transcriptome id Sobic.001G342700.1
Synonym
Functional annotation protein phosphotase protein, putative, expressed
UniProt A0A1Z5S924
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF284
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G09160 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os07g49040.1 : protein phosphotase protein, putative, expressed
MaizeGDB (Corn) Zm00025a051859 , Zm00025a052606 , Zm00025a015498 , Zm00025a049239
Brachypodium KQK14517 , KQK22047 , KQK14516 , KQK14514 , PNT74534 , PNT74533
Barley HORVU2Hr1G015470.3 , HORVU2Hr1G015470.2 , HORVU2Hr1G015470.1 , HORVU2Hr1G015470.5 , HORVU2Hr1G015470.4 , HORVU2Hr1G015480.2 , HORVU2Hr1G015480.1 , HORVU5Hr1G067020.2
Wheat TraesCS2B02G108200 , TraesCS2A02G093700 , TraesCS2A02G093700 , TraesCS2A02G093700 , TraesCS2A02G093700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G067300 Cupin domain containing protein, expressed -
2 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
3 Sobic.009G009400 expressed protein -
4 Sobic.005G169100 cytochrome P450, putative, expressed -
5 Sobic.002G146100 - -
6 Sobic.006G033260 - -
7 Sobic.002G182500 nucleic acid binding protein, putative, expressed -
8 Sobic.008G068166 - -
9 Sobic.008G054150 - -
10 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
11 Sobic.007G158700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@phospholipase A("PubMedID : 26759170,PubMedID : 24597475")@patatin, putative, expressed -
12 Sobic.010G102300 expressed protein -
13 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
14 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G343500 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
16 Sobic.001G260000 SAP domain containing protein, expressed -
17 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.004G128400 O-methyltransferase, putative, expressed -
19 Sobic.004G115500 expressed protein -
20 Sobic.002G182400 - -


Gene co-expression network
sample Sobic001G342700 Sobic001G342700 Sobic007G067300 Sobic007G067300 Sobic001G342700--Sobic007G067300 Sobic001G343601 Sobic001G343601 Sobic001G342700--Sobic001G343601 Sobic009G009400 Sobic009G009400 Sobic001G342700--Sobic009G009400 Sobic005G169100 Sobic005G169100 Sobic001G342700--Sobic005G169100 Sobic002G146100 Sobic002G146100 Sobic001G342700--Sobic002G146100 Sobic006G033260 Sobic006G033260 Sobic001G342700--Sobic006G033260 Sobic002G182500 Sobic002G182500 Sobic001G342700--Sobic002G182500 Sobic008G068166 Sobic008G068166 Sobic001G342700--Sobic008G068166 Sobic008G054150 Sobic008G054150 Sobic001G342700--Sobic008G054150 Sobic007G067300--Sobic001G342700 Sobic007G067300--Sobic005G169100 Sobic006G206900 Sobic006G206900 Sobic007G067300--Sobic006G206900 Sobic007G067300--Sobic008G068166 Sobic005G045500 Sobic005G045500 Sobic007G067300--Sobic005G045500 Sobic010G102300 Sobic010G102300 Sobic007G067300--Sobic010G102300 Sobic007G015800 Sobic007G015800 Sobic007G067300--Sobic007G015800 Sobic007G066908 Sobic007G066908 Sobic007G067300--Sobic007G066908 Sobic007G067300--Sobic009G009400 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G343601--Sobic001G342700 Sobic001G260000 Sobic001G260000 Sobic001G343601--Sobic001G260000 Sobic007G169500 Sobic007G169500 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic004G115500 Sobic004G115500 Sobic001G343601--Sobic004G115500 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700 Sobic009G009400--Sobic001G343601 Sobic009G009400--Sobic007G169500 Sobic009G009400--Sobic008G054150 Sobic009G009400--Sobic001G342700 Sobic009G043700 Sobic009G043700 Sobic009G009400--Sobic009G043700 Sobic009G009400--Sobic004G115500 Sobic009G009400--Sobic001G260000 Sobic009G009400--Sobic002G146100 Sobic009G009400--Sobic002G182500 Sobic005G169100--Sobic007G067300 Sobic005G169100--Sobic001G342700 Sobic005G169100--Sobic007G015800 Sobic005G169100--Sobic007G066908 Sobic005G169100--Sobic006G206900 Sobic005G169100--Sobic010G102300 Sobic005G169100--Sobic002G182500 Sobic010G035700 Sobic010G035700 Sobic005G169100--Sobic010G035700 Sobic001G319700 Sobic001G319700 Sobic005G169100--Sobic001G319700 Sobic002G146100--Sobic001G343601 Sobic002G146100--Sobic001G342700 Sobic002G146100--Sobic009G009400 Sobic002G146100--Sobic008G054150 Sobic002G146100--Sobic001G260000 Sobic002G146100--Sobic006G033260 Sobic002G146100--Sobic007G169500 Sobic001G343832 Sobic001G343832 Sobic002G146100--Sobic001G343832 Sobic002G146100--Sobic002G182500 Sobic006G033260--Sobic001G342700 Sobic006G033260--Sobic001G343601 Sobic006G033260--Sobic002G146100 Sobic001G357100 Sobic001G357100 Sobic006G033260--Sobic001G357100 Sobic006G033260--Sobic008G054150 Sobic006G033260--Sobic009G009400 Sobic006G033260--Sobic007G067300 Sobic006G033260--Sobic007G169500 Sobic006G033260--Sobic001G260000 Sobic004G128400 Sobic004G128400 Sobic002G182500--Sobic004G128400 Sobic002G182500--Sobic001G342700 Sobic002G182500--Sobic001G343601 Sobic002G182400 Sobic002G182400 Sobic002G182500--Sobic002G182400 Sobic002G182500--Sobic009G009400 Sobic002G182500--Sobic005G169100 Sobic006G036500 Sobic006G036500 Sobic002G182500--Sobic006G036500 Sobic002G183100 Sobic002G183100 Sobic002G182500--Sobic002G183100 Sobic002G182500--Sobic001G260000 Sobic008G068166--Sobic007G067300 Sobic008G068166--Sobic005G169100 Sobic008G068166--Sobic001G342700 Sobic008G068166--Sobic009G009400 Sobic008G068166--Sobic006G206900 Sobic008G068166--Sobic007G066908 Sobic001G495148 Sobic001G495148 Sobic008G068166--Sobic001G495148 Sobic001G121850 Sobic001G121850 Sobic008G068166--Sobic001G121850 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic006G057500 Sobic006G057500 Sobic008G054150--Sobic006G057500 Sobic004G341000 Sobic004G341000 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750
Octagon: transcription factors


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