Gene annotation
Transcriptome id Sobic.006G036500.1
Synonym CYP38, ATCYP38
Functional annotation peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed
UniProt A0A1B6PJX2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01480 : cyclophilin 38
RAP-DB (Rice) LOC_Os08g29370.1 : peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G038800 purple acid phosphatase 27("PubMedID : 26759170,PubMedID : 24597475")@nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
2 Sobic.002G156900 expressed protein -
3 Sobic.002G182500 nucleic acid binding protein, putative, expressed -
4 Sobic.004G189301 - -
5 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G002100 phosphoglycerate mutase, putative, expressed -
7 Sobic.010G110266 - -
8 Sobic.002G018500 - -
9 Sobic.005G089500 kinase, putative, expressed -
10 Sobic.006G277550 - K00430: peroxidase
11 Sobic.004G128400 O-methyltransferase, putative, expressed -
12 Sobic.002G182400 - -
13 Sobic.001G248500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
14 Sobic.002G184100 heat shock protein DnaJ, putative, expressed -
15 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
16 Sobic.008G044500 zinc finger superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
17 Sobic.001G320400 lysM domain containing protein, putative, expressed -
18 Sobic.009G158700 - -
19 Sobic.001G348700 - -
20 Sobic.006G024000 Fusarium graminearum mycotoxi deoxynivaleno (DON) detoxification gene. Conferred resistance to DON(PubMedID : 23550529)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucosyltransferase("PubMedID : 26759170,PubMedID : 24597475")@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic006G036500 Sobic006G036500 Sobic006G038800 Sobic006G038800 Sobic006G036500--Sobic006G038800 Sobic002G156900 Sobic002G156900 Sobic006G036500--Sobic002G156900 Sobic002G182500 Sobic002G182500 Sobic006G036500--Sobic002G182500 Sobic004G189301 Sobic004G189301 Sobic006G036500--Sobic004G189301 Sobic002G183100 Sobic002G183100 Sobic006G036500--Sobic002G183100 Sobic006G002100 Sobic006G002100 Sobic006G036500--Sobic006G002100 Sobic010G110266 Sobic010G110266 Sobic006G036500--Sobic010G110266 Sobic002G018500 Sobic002G018500 Sobic006G036500--Sobic002G018500 Sobic005G089500 Sobic005G089500 Sobic006G036500--Sobic005G089500 Sobic006G038800--Sobic006G036500 Sobic006G038800--Sobic005G089500 Sobic006G038800--Sobic002G183100 Sobic006G277550 Sobic006G277550 Sobic006G038800--Sobic006G277550 Sobic006G038800--Sobic002G018500 Sobic006G038800--Sobic002G156900 Sobic006G038800--Sobic002G182500 Sobic006G038800--Sobic006G002100 Sobic001G248500 Sobic001G248500 Sobic006G038800--Sobic001G248500 Sobic002G156900--Sobic006G036500 Sobic008G092932 Sobic008G092932 Sobic002G156900--Sobic008G092932 Sobic002G156900--Sobic006G038800 Sobic002G156900--Sobic010G110266 Sobic008G121400 Sobic008G121400 Sobic002G156900--Sobic008G121400 Sobic002G156900--Sobic006G002100 Sobic007G101900 Sobic007G101900 Sobic002G156900--Sobic007G101900 Sobic002G156900--Sobic002G183100 Sobic002G156900--Sobic005G089500 Sobic004G128400 Sobic004G128400 Sobic002G182500--Sobic004G128400 Sobic001G342700 Sobic001G342700 Sobic002G182500--Sobic001G342700 Sobic001G343601 Sobic001G343601 Sobic002G182500--Sobic001G343601 Sobic002G182400 Sobic002G182400 Sobic002G182500--Sobic002G182400 Sobic009G009400 Sobic009G009400 Sobic002G182500--Sobic009G009400 Sobic005G169100 Sobic005G169100 Sobic002G182500--Sobic005G169100 Sobic002G182500--Sobic006G036500 Sobic002G182500--Sobic002G183100 Sobic001G260000 Sobic001G260000 Sobic002G182500--Sobic001G260000 Sobic004G189301--Sobic006G036500 Sobic004G189301--Sobic006G038800 Sobic008G044500 Sobic008G044500 Sobic004G189301--Sobic008G044500 Sobic004G189301--Sobic002G156900 Sobic004G189301--Sobic002G018500 Sobic001G382266 Sobic001G382266 Sobic004G189301--Sobic001G382266 Sobic008G140300 Sobic008G140300 Sobic002G183100--Sobic008G140300 Sobic001G348700 Sobic001G348700 Sobic002G183100--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic002G183100--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G183100--Sobic007G067400 Sobic010G084700 Sobic010G084700 Sobic002G183100--Sobic010G084700 Sobic001G487300 Sobic001G487300 Sobic002G183100--Sobic001G487300 Sobic004G037000 Sobic004G037000 Sobic002G183100--Sobic004G037000 Sobic002G184200 Sobic002G184200 Sobic002G183100--Sobic002G184200 Sobic002G183100--Sobic002G182500 Sobic006G002100--Sobic002G183100 Sobic007G016100 Sobic007G016100 Sobic006G002100--Sobic007G016100 Sobic006G002100--Sobic006G036500 Sobic006G107200 Sobic006G107200 Sobic006G002100--Sobic006G107200 Sobic006G002100--Sobic006G038800 Sobic006G002100--Sobic004G037000 Sobic006G002100--Sobic001G248500 Sobic006G002100--Sobic002G156900 Sobic006G002100--Sobic001G348700 Sobic010G110266--Sobic008G121400 Sobic006G063400 Sobic006G063400 Sobic010G110266--Sobic006G063400 Sobic010G110266--Sobic006G036500 Sobic010G136400 Sobic010G136400 Sobic010G110266--Sobic010G136400 Sobic010G110266--Sobic002G156900 Sobic010G110266--Sobic007G101900 Sobic010G149700 Sobic010G149700 Sobic010G110266--Sobic010G149700 Sobic010G110266--Sobic008G092932 Sobic010G110266--Sobic006G038800 Sobic007G135201 Sobic007G135201 Sobic002G018500--Sobic007G135201 Sobic002G018500--Sobic004G128400 Sobic001G453100 Sobic001G453100 Sobic002G018500--Sobic001G453100 Sobic002G018500--Sobic006G038800 Sobic002G018500--Sobic002G182500 Sobic007G067600 Sobic007G067600 Sobic002G018500--Sobic007G067600 Sobic003G426100 Sobic003G426100 Sobic002G018500--Sobic003G426100 Sobic004G111800 Sobic004G111800 Sobic002G018500--Sobic004G111800 Sobic007G066932 Sobic007G066932 Sobic002G018500--Sobic007G066932 Sobic005G089500--Sobic006G038800 Sobic005G089500--Sobic006G036500 Sobic005G089500--Sobic002G156900 Sobic010G044001 Sobic010G044001 Sobic005G089500--Sobic010G044001 Sobic005G089500--Sobic006G277550 Sobic005G089500--Sobic002G183100 Sobic005G089500--Sobic006G002100 Sobic005G089500--Sobic002G018500 Sobic001G320400 Sobic001G320400 Sobic005G089500--Sobic001G320400
Octagon: transcription factors


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