Gene annotation
| Transcriptome id | Sobic.001G276900.2 |
|---|---|
| Synonym | JAZ2, Sb01g027325, TIFY10B |
| Functional annotation | ZIM domain containing protein, putative, expressed |
| UniProt | A0A1Z5S7Y9 |
| Pfam | PF06200 PF09425 |
| Panther DB | PTHR33077 PTHR33077:SF4 |
| NCBI CDD | - |
| KEGG Orthology | K13464; jasmonate ZIM domain-containing protein |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G19180 : jasmonate-zim-domain protein 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g08330.1 : ZIM domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a053283 , Zm00025a000928 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G440200 | senescence-associated protein, putative, expressed | - |
| 2 | Sobic.006G267000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed | - |
| 3 | Sobic.001G398500 | expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed | - |
| 4 | Sobic.001G035000 | ZOS3-22 - C2H2 zinc finger protein, expressed | - |
| 5 | Sobic.001G441100 | immediate-early fungal elicitor protein CMPG1, putative, expressed | - |
| 6 | Sobic.007G057700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- | - |
| 7 | Sobic.003G353800 | avr9/Cf-9 rapidly elicited protein, putative, expressed | - |
| 8 | Sobic.004G228900 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed | K13993: HSP20 family protein |
| 9 | Sobic.006G148000 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 10 | Sobic.002G278500 | nodulin, putative, expressed | - |
| 11 | Sobic.009G217600 | STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 12 | Sobic.009G184400 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 13 | Sobic.001G341600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed | - |
| 14 | Sobic.007G057800 | - | - |
| 15 | Sobic.001G495132 | - | - |
| 16 | Sobic.010G104300 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 17 | Sobic.002G131800 | copine, putative, expressed | K16280: E3 ubiquitin-protein ligase RGLG |
| 18 | Sobic.008G042900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed | - |
| 19 | Sobic.003G387200 | - | - |
| 20 | Sobic.001G189700 | DNAJ heat shock N-terminal domain-containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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