Gene annotation
Transcriptome id Sobic.009G184400.1
Synonym Sb09g024400, ethylene response factor 97, SbERF97, ERF9, ATERF9, ATERF-9
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5Z0C2
Pfam PF00847
Panther DB PTHR31677:SF19 PTHR31677
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003700; DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G44210 : erf domain protein 9
RAP-DB (Rice) LOC_Os05g41780.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044110 , Zm00025a037864 , Zm00025a034702 , Zm00025a027212
Brachypodium KQJ96899 , KQK05591
Barley HORVU3Hr1G078150.1 , HORVU3Hr1G078150.2 , HORVU3Hr1G078150.3 , HORVU0Hr1G007050.1 , HORVU0Hr1G007050.2
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G184400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
3 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
5 Sobic.002G248100 expressed protein -
6 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
7 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
8 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
9 Sobic.001G476400 - -
10 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
11 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
12 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.002G278500 nodulin, putative, expressed -
15 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
16 Sobic.003G150400 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@homeodomain, putative, expressed -
17 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
18 Sobic.005G037000 cytochrome P450, putative, expressed -
19 Sobic.010G030900 glycosyltransferase, putative, expressed -
20 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG


Gene co-expression network
sample Sobic009G184400 Sobic009G184400 Sobic001G209800 Sobic001G209800 Sobic009G184400--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic009G184400--Sobic001G441100 Sobic009G217600 Sobic009G217600 Sobic009G184400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic009G184400--Sobic001G035000 Sobic002G248100 Sobic002G248100 Sobic009G184400--Sobic002G248100 Sobic001G398500 Sobic001G398500 Sobic009G184400--Sobic001G398500 Sobic002G294700 Sobic002G294700 Sobic009G184400--Sobic002G294700 Sobic001G077400 Sobic001G077400 Sobic009G184400--Sobic001G077400 Sobic001G476400 Sobic001G476400 Sobic009G184400--Sobic001G476400 Sobic001G209800--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G209800--Sobic004G280900 Sobic001G209800--Sobic009G217600 Sobic001G209800--Sobic001G035000 Sobic005G037000 Sobic005G037000 Sobic001G209800--Sobic005G037000 Sobic001G209800--Sobic001G441100 Sobic010G076600 Sobic010G076600 Sobic001G209800--Sobic010G076600 Sobic001G341600 Sobic001G341600 Sobic001G209800--Sobic001G341600 Sobic006G274300 Sobic006G274300 Sobic001G209800--Sobic006G274300 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic002G278500 Sobic002G278500 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic002G140300 Sobic002G140300 Sobic001G441100--Sobic002G140300 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic001G035000--Sobic001G441100 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G035000--Sobic001G341600 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic001G035000--Sobic004G280900 Sobic001G077700 Sobic001G077700 Sobic002G248100--Sobic001G077700 Sobic008G177800 Sobic008G177800 Sobic002G248100--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G248100--Sobic010G234600 Sobic002G248100--Sobic002G294700 Sobic009G071800 Sobic009G071800 Sobic002G248100--Sobic009G071800 Sobic004G286600 Sobic004G286600 Sobic002G248100--Sobic004G286600 Sobic002G203000 Sobic002G203000 Sobic002G248100--Sobic002G203000 Sobic009G255500 Sobic009G255500 Sobic002G248100--Sobic009G255500 Sobic006G231100 Sobic006G231100 Sobic002G248100--Sobic006G231100 Sobic001G398500--Sobic009G071800 Sobic002G217100 Sobic002G217100 Sobic001G398500--Sobic002G217100 Sobic006G184400 Sobic006G184400 Sobic001G398500--Sobic006G184400 Sobic003G150400 Sobic003G150400 Sobic001G398500--Sobic003G150400 Sobic001G398500--Sobic009G184400 Sobic001G398500--Sobic001G476400 Sobic001G398500--Sobic001G209800 Sobic001G398500--Sobic001G077700 Sobic010G076700 Sobic010G076700 Sobic001G398500--Sobic010G076700 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G294700--Sobic002G278500 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic002G036100 Sobic002G036100 Sobic001G077400--Sobic002G036100 Sobic006G165100 Sobic006G165100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600 Sobic001G063600 Sobic001G063600 Sobic001G476400--Sobic001G063600 Sobic001G051600 Sobic001G051600 Sobic001G476400--Sobic001G051600 Sobic001G473900 Sobic001G473900 Sobic001G476400--Sobic001G473900 Sobic001G476400--Sobic010G076600 Sobic001G081600 Sobic001G081600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic006G095600 Sobic006G095600 Sobic001G476400--Sobic006G095600 Sobic004G283300 Sobic004G283300 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.