Gene annotation
Transcriptome id Sobic.004G319700.1
Synonym
Functional annotation ethylene-responsive transcription factor, putative, expressed
UniProt A0A194YSQ6
Pfam PF00847
Panther DB PTHR31985
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G19210 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g54050.1 : ethylene-responsive transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a020705 , Zm00025a033019 , Zm00025a056129
Brachypodium KQJ82836 , KQK02043 , KQK01579
Barley HORVU2Hr1G077190.1 , HORVU6Hr1G081980.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
4 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G278500 nodulin, putative, expressed -
7 Sobic.005G037000 cytochrome P450, putative, expressed -
8 Sobic.006G163401 - -
9 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
10 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.002G335200 expressed protein -
12 Sobic.003G339100 DUF623 domain containing protein, expressed -
13 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.007G126300 spotted leaf 11, putative, expressed -
16 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
17 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
19 Sobic.001G205350 - -
20 Sobic.001G476400 - -


Gene co-expression network
sample Sobic004G319700 Sobic004G319700 Sobic009G120800 Sobic009G120800 Sobic004G319700--Sobic009G120800 Sobic004G280900 Sobic004G280900 Sobic004G319700--Sobic004G280900 Sobic001G441100 Sobic001G441100 Sobic004G319700--Sobic001G441100 Sobic009G217600 Sobic009G217600 Sobic004G319700--Sobic009G217600 Sobic007G122500 Sobic007G122500 Sobic004G319700--Sobic007G122500 Sobic002G278500 Sobic002G278500 Sobic004G319700--Sobic002G278500 Sobic005G037000 Sobic005G037000 Sobic004G319700--Sobic005G037000 Sobic006G163401 Sobic006G163401 Sobic004G319700--Sobic006G163401 Sobic001G077400 Sobic001G077400 Sobic004G319700--Sobic001G077400 Sobic009G120800--Sobic004G319700 Sobic009G120800--Sobic001G441100 Sobic009G120800--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic009G120800--Sobic001G035000 Sobic003G416500 Sobic003G416500 Sobic009G120800--Sobic003G416500 Sobic009G120800--Sobic005G037000 Sobic009G120800--Sobic007G122500 Sobic001G341600 Sobic001G341600 Sobic009G120800--Sobic001G341600 Sobic009G120800--Sobic004G280900 Sobic004G280900--Sobic001G077400 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic001G209800 Sobic001G209800 Sobic004G280900--Sobic001G209800 Sobic004G280900--Sobic001G441100 Sobic002G036100 Sobic002G036100 Sobic004G280900--Sobic002G036100 Sobic002G140300 Sobic002G140300 Sobic004G280900--Sobic002G140300 Sobic001G538866 Sobic001G538866 Sobic004G280900--Sobic001G538866 Sobic004G280900--Sobic001G341600 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic007G122500--Sobic005G037000 Sobic004G032300 Sobic004G032300 Sobic007G122500--Sobic004G032300 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G126300 Sobic007G126300 Sobic007G122500--Sobic007G126300 Sobic006G187900 Sobic006G187900 Sobic007G122500--Sobic006G187900 Sobic007G122500--Sobic009G217600 Sobic004G228900 Sobic004G228900 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic001G338600 Sobic001G338600 Sobic002G278500--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic002G278500--Sobic005G122500 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic005G037000--Sobic007G126300 Sobic001G259600 Sobic001G259600 Sobic005G037000--Sobic001G259600 Sobic006G165100 Sobic006G165100 Sobic005G037000--Sobic006G165100 Sobic006G163401--Sobic002G225700 Sobic004G295600 Sobic004G295600 Sobic006G163401--Sobic004G295600 Sobic006G163401--Sobic004G319700 Sobic006G163401--Sobic007G122500 Sobic006G163401--Sobic009G120800 Sobic002G269100 Sobic002G269100 Sobic006G163401--Sobic002G269100 Sobic006G163401--Sobic004G032300 Sobic010G104300 Sobic010G104300 Sobic006G163401--Sobic010G104300 Sobic006G163401--Sobic001G441100 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600
Octagon: transcription factors


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