Gene annotation
Transcriptome id Sobic.001G205350.1,Sobic.001G205350.2
Synonym -
Functional annotation -
UniProt A0A1Z5S6J7 , A0A1Z5S6K5
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF869
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51000 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g35520.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017500 , Zm00025a016385 , Zm00025a016384 , Zm00025a006456
Brachypodium KQJ87583
Barley HORVU2Hr1G116250.5 , HORVU2Hr1G116250.4 , HORVU2Hr1G116250.1 , HORVU2Hr1G116250.2 , HORVU1Hr1G044770.5 , HORVU1Hr1G044770.4 , HORVU1Hr1G044770.6 , HORVU1Hr1G044770.1 , HORVU1Hr1G044770.3 , HORVU1Hr1G044770.2 , HORVU2Hr1G116180.5 , HORVU2Hr1G116180.4 , HORVU2Hr1G116180.3 , HORVU2Hr1G116180.2 , HORVU1Hr1G044740.1 , HORVU1Hr1G044740.2
Wheat TraesCS2A02G526600 , TraesCS1A02G170600 , TraesCS1A02G170600 , TraesCS1B02G186700 , TraesCS1D02G168400 , TraesCS1B02G186600 , TraesCS2D02G529300 , TraesCS1D02G168300 , TraesCS1D02G168300 , TraesCS1D02G168300 , TraesCS1A02G170700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G282300 expressed protein -
2 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
3 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
4 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
5 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
6 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
7 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
8 Sobic.003G380900 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659872)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
9 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G278500 nodulin, putative, expressed -
11 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
12 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
13 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
14 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
15 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
16 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
17 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.002G358300 expressed protein -
19 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
20 Sobic.004G308900 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G205350 Sobic001G205350 Sobic002G282300 Sobic002G282300 Sobic001G205350--Sobic002G282300 Sobic006G230900 Sobic006G230900 Sobic001G205350--Sobic006G230900 Sobic007G213800 Sobic007G213800 Sobic001G205350--Sobic007G213800 Sobic004G169200 Sobic004G169200 Sobic001G205350--Sobic004G169200 Sobic001G338600 Sobic001G338600 Sobic001G205350--Sobic001G338600 Sobic006G231200 Sobic006G231200 Sobic001G205350--Sobic006G231200 Sobic002G189100 Sobic002G189100 Sobic001G205350--Sobic002G189100 Sobic003G380900 Sobic003G380900 Sobic001G205350--Sobic003G380900 Sobic003G428700 Sobic003G428700 Sobic001G205350--Sobic003G428700 Sobic002G282300--Sobic006G230900 Sobic002G282300--Sobic007G213800 Sobic002G282300--Sobic001G205350 Sobic002G282300--Sobic001G338600 Sobic003G144700 Sobic003G144700 Sobic002G282300--Sobic003G144700 Sobic003G197200 Sobic003G197200 Sobic002G282300--Sobic003G197200 Sobic002G282300--Sobic006G231200 Sobic001G320900 Sobic001G320900 Sobic002G282300--Sobic001G320900 Sobic002G282300--Sobic004G169200 Sobic006G230900--Sobic006G231200 Sobic006G231100 Sobic006G231100 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic010G217800 Sobic010G217800 Sobic006G230900--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic006G230900--Sobic003G197200 Sobic007G213800--Sobic003G144700 Sobic001G391500 Sobic001G391500 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic007G213800--Sobic003G197200 Sobic001G138600 Sobic001G138600 Sobic007G213800--Sobic001G138600 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic001G459800 Sobic001G459800 Sobic007G213800--Sobic001G459800 Sobic002G395300 Sobic002G395300 Sobic004G169200--Sobic002G395300 Sobic002G358300 Sobic002G358300 Sobic004G169200--Sobic002G358300 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G191400 Sobic004G191400 Sobic004G169200--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G169200--Sobic009G122400 Sobic004G169200--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic001G338600--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G338600--Sobic002G278500 Sobic004G228900 Sobic004G228900 Sobic001G338600--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic001G338600--Sobic001G426000 Sobic001G338600--Sobic001G205350 Sobic001G338600--Sobic006G230900 Sobic001G338600--Sobic003G144700 Sobic001G441100 Sobic001G441100 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic006G231200--Sobic006G230900 Sobic006G231200--Sobic006G231100 Sobic006G231200--Sobic007G213800 Sobic006G231200--Sobic001G459800 Sobic006G231200--Sobic010G217800 Sobic006G231200--Sobic003G144700 Sobic006G267200 Sobic006G267200 Sobic006G231200--Sobic006G267200 Sobic006G231200--Sobic002G282300 Sobic006G231200--Sobic001G320900 Sobic003G228900 Sobic003G228900 Sobic002G189100--Sobic003G228900 Sobic003G093000 Sobic003G093000 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic003G380900--Sobic003G428700 Sobic001G079300 Sobic001G079300 Sobic003G380900--Sobic001G079300 Sobic003G380900--Sobic009G122400 Sobic003G380900--Sobic010G209200 Sobic003G380900--Sobic004G191400 Sobic004G222500 Sobic004G222500 Sobic003G380900--Sobic004G222500 Sobic009G247900 Sobic009G247900 Sobic003G380900--Sobic009G247900 Sobic003G380900--Sobic001G205350 Sobic003G380900--Sobic003G093000 Sobic003G428700--Sobic009G122400 Sobic003G428700--Sobic010G209200 Sobic003G428700--Sobic004G191400 Sobic003G428700--Sobic004G169200 Sobic003G428700--Sobic003G093000 Sobic003G428700--Sobic004G222500 Sobic003G428700--Sobic009G247900 Sobic003G428700--Sobic002G220000 Sobic001G035100 Sobic001G035100 Sobic003G428700--Sobic001G035100
Octagon: transcription factors


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