Gene annotation
| Transcriptome id | Sobic.004G036600.1 |
|---|---|
| Synonym | Sb04g003150 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) activator of 90 kDa heat shock protein ATPase homolog, putative, expressed |
| UniProt | C5XUJ1 |
| Pfam | PF09229 |
| Panther DB | PTHR13009 PTHR13009:SF5 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0001671; ATPase activator activity |
Orthologs (automatic annotation)
| TAIR | AT5G58110 : chaperone binding;ATPase activators |
|---|---|
| RAP-DB (Rice) | LOC_Os02g04650.1 : activator of 90 kDa heat shock protein ATPase homolog, putative, expressed |
| MaizeGDB (Corn) | Zm00025a018940 , Zm00025a035025 |
| Brachypodium | KQJ93269 |
| Barley | HORVU6Hr1G019520.10 , HORVU6Hr1G019520.9 , HORVU6Hr1G019520.8 , HORVU6Hr1G019520.1 , HORVU6Hr1G019520.3 , HORVU6Hr1G019520.2 , HORVU6Hr1G019520.5 , HORVU6Hr1G019520.4 , HORVU6Hr1G019520.6 |
| Wheat | TraesCS6D02G097400 , TraesCS6B02G137600 , TraesCS6D02G097400 , TraesCS6A02G109000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G294700 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 2 | Sobic.008G177800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed | K10712: cysteamine dioxygenase |
| 3 | Sobic.006G231100 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed | - |
| 4 | Sobic.001G173300 | alpha-1,4-glucan-protein synthase, putative, expressed | K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase |
| 5 | Sobic.010G234600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed | - |
| 6 | Sobic.001G516600 | AMP-binding domain containing protein, expressed | K10526: OPC-8:0 CoA ligase 1 |
| 7 | Sobic.002G374100 | tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed | K13464: jasmonate ZIM domain-containing protein |
| 8 | Sobic.009G141800 | cytochrome c, putative, expressed | K08738: cytochrome c |
| 9 | Sobic.009G217000 | chaperone protein dnaJ 10, putative, expressed | - |
| 10 | Sobic.003G094200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed | - |
| 11 | Sobic.010G217800 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 12 | Sobic.006G267200 | pyruvate kinase, putative, expressed | K00873: PK, pyruvate kinase |
| 13 | Sobic.006G194000 | DUF581 domain containing protein, expressed | - |
| 14 | Sobic.009G129000 | E3 ubiquitin-protein ligase MGRN1, putative, expressed | - |
| 15 | Sobic.003G288600 | reticulon domain containing protein, putative, expressed | - |
| 16 | Sobic.010G246000 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 17 | Sobic.010G220200 | haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed | - |
| 18 | Sobic.003G310700 | mal d 1-associated protein, putative, expressed | - |
| 19 | Sobic.001G101500 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed | K10950: ERO1-like protein alpha |
| 20 | Sobic.002G278500 | nodulin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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