Gene annotation
Transcriptome id Sobic.003G323201.1
Synonym -
Functional annotation -
UniProt A0A1W0VZZ3
Pfam -
Panther DB PTHR33647 PTHR33647:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g58150.1 : expressed protein
MaizeGDB (Corn) Zm00025a039862
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G194400 expressed protein -
2 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.004G308900 AP2 domain containing protein, expressed -
7 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
9 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
11 Sobic.001G195200 cytochrome P450, putative, expressed -
12 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.002G358300 expressed protein -
14 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
15 Sobic.007G156700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.004G283500 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.004G097100 F-box family protein, putative, expressed -
18 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein


Gene co-expression network
sample Sobic003G323201 Sobic003G323201 Sobic009G194400 Sobic009G194400 Sobic003G323201--Sobic009G194400 Sobic010G196600 Sobic010G196600 Sobic003G323201--Sobic010G196600 Sobic001G425500 Sobic001G425500 Sobic003G323201--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic003G323201--Sobic004G109700 Sobic001G425600 Sobic001G425600 Sobic003G323201--Sobic001G425600 Sobic004G308900 Sobic004G308900 Sobic003G323201--Sobic004G308900 Sobic004G109600 Sobic004G109600 Sobic003G323201--Sobic004G109600 Sobic002G388900 Sobic002G388900 Sobic003G323201--Sobic002G388900 Sobic009G144700 Sobic009G144700 Sobic003G323201--Sobic009G144700 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic004G092800 Sobic004G092800 Sobic009G194400--Sobic004G092800 Sobic010G196600--Sobic009G194400 Sobic010G196600--Sobic001G425500 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic010G196600--Sobic001G425600 Sobic010G196600--Sobic004G109600 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic004G109700--Sobic001G481300 Sobic004G109700--Sobic010G196600 Sobic004G109700--Sobic009G194400 Sobic004G109700--Sobic003G323201 Sobic007G214600 Sobic007G214600 Sobic004G109700--Sobic007G214600 Sobic001G279350 Sobic001G279350 Sobic004G109700--Sobic001G279350 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201 Sobic002G358300 Sobic002G358300 Sobic004G308900--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic004G308900--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic004G308900--Sobic001G195200 Sobic001G256700 Sobic001G256700 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic009G032000 Sobic009G032000 Sobic004G308900--Sobic009G032000 Sobic004G246600 Sobic004G246600 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic004G109600--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic004G109600--Sobic003G197200 Sobic010G198500 Sobic010G198500 Sobic004G109600--Sobic010G198500 Sobic003G148600 Sobic003G148600 Sobic004G109600--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic004G109600--Sobic001G371800 Sobic001G201200 Sobic001G201200 Sobic004G109600--Sobic001G201200 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic002G388900--Sobic009G144700 Sobic001G330100 Sobic001G330100 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic004G219800 Sobic004G219800 Sobic002G388900--Sobic004G219800 Sobic002G388900--Sobic004G308900 Sobic004G108200 Sobic004G108200 Sobic009G144700--Sobic004G108200 Sobic009G144700--Sobic001G330100 Sobic009G144700--Sobic002G388900 Sobic009G144700--Sobic004G352000 Sobic009G144700--Sobic001G256700 Sobic001G330200 Sobic001G330200 Sobic009G144700--Sobic001G330200 Sobic003G148300 Sobic003G148300 Sobic009G144700--Sobic003G148300 Sobic004G294400 Sobic004G294400 Sobic009G144700--Sobic004G294400 Sobic002G395300 Sobic002G395300 Sobic009G144700--Sobic002G395300
Octagon: transcription factors


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