Gene annotation
Transcriptome id Sobic.007G156700.1
Synonym SbERF83, RRTF1,ethylene response factor 83, Sb07g023030
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1Z5RB18
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G34410 : redox responsive transcription factor 1
RAP-DB (Rice) LOC_Os08g36920.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005317 , Zm00025a022220 , Zm00025a003372 , Zm00025a037299 , Zm00025a005425 , Zm00025a000949 , Zm00025a000671
Brachypodium KQJ91112 , KQJ82323 , KQJ82324 , KQK23284 , KQJ98629 , KQJ92086 , PNT62439 , KQJ86112 , KQK00588 , KQJ93405 , KQJ94686 , KQK01756
Barley HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU4Hr1G080300.1 , HORVU6Hr1G078520.1 , HORVU6Hr1G078520.2 , HORVU4Hr1G077310.5 , HORVU6Hr1G078510.1 , HORVU6Hr1G078510.3 , HORVU6Hr1G078510.2 , HORVU5Hr1G080790.4 , HORVU5Hr1G080790.3 , HORVU5Hr1G080790.2 , HORVU5Hr1G080790.1 , HORVU5Hr1G068450.1 , HORVU0Hr1G015360.1 , HORVU1Hr1G082310.1
Wheat TraesCS5D02G129400 , TraesCS5A02G112600 , TraesCS5B02G118200 , TraesCS4B02G299500 , TraesCS4A02G005600 , TraesCS4B02G299400 , TraesCS5B02G315500 , TraesCS5D02G320800 , TraesCS4D02G298400 , TraesCS5B02G315500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G308900 AP2 domain containing protein, expressed -
2 Sobic.002G358300 expressed protein -
3 Sobic.007G122800 expressed protein -
4 Sobic.003G323201 - -
5 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
7 Sobic.004G191400 - -
8 Sobic.004G246600 expressed protein -
9 Sobic.001G195200 cytochrome P450, putative, expressed -
10 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
12 Sobic.009G122400 expressed protein -
13 Sobic.004G191300 - -
14 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.004G097100 F-box family protein, putative, expressed -
16 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
17 Sobic.002G282300 expressed protein -
18 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.004G294400 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic007G156700 Sobic007G156700 Sobic004G308900 Sobic004G308900 Sobic007G156700--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic007G156700--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic007G156700--Sobic007G122800 Sobic003G323201 Sobic003G323201 Sobic007G156700--Sobic003G323201 Sobic002G269100 Sobic002G269100 Sobic007G156700--Sobic002G269100 Sobic004G169200 Sobic004G169200 Sobic007G156700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic007G156700--Sobic004G191400 Sobic004G246600 Sobic004G246600 Sobic007G156700--Sobic004G246600 Sobic001G195200 Sobic001G195200 Sobic007G156700--Sobic001G195200 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic001G256700 Sobic001G256700 Sobic004G308900--Sobic001G256700 Sobic004G308900--Sobic004G191400 Sobic009G032000 Sobic009G032000 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic002G388900 Sobic002G388900 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G395300 Sobic002G395300 Sobic002G358300--Sobic002G395300 Sobic004G294400 Sobic004G294400 Sobic002G358300--Sobic004G294400 Sobic007G122800--Sobic002G358300 Sobic007G122800--Sobic004G308900 Sobic007G122800--Sobic004G191400 Sobic007G122800--Sobic004G294400 Sobic007G122800--Sobic004G191300 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic009G122400 Sobic009G122400 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic009G194400 Sobic009G194400 Sobic003G323201--Sobic009G194400 Sobic010G196600 Sobic010G196600 Sobic003G323201--Sobic010G196600 Sobic001G425500 Sobic001G425500 Sobic003G323201--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic003G323201--Sobic004G109700 Sobic001G425600 Sobic001G425600 Sobic003G323201--Sobic001G425600 Sobic003G323201--Sobic004G308900 Sobic004G109600 Sobic004G109600 Sobic003G323201--Sobic004G109600 Sobic003G323201--Sobic002G388900 Sobic009G144700 Sobic009G144700 Sobic003G323201--Sobic009G144700 Sobic001G143100 Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic004G295600 Sobic004G295600 Sobic002G269100--Sobic004G295600 Sobic004G097100 Sobic004G097100 Sobic002G269100--Sobic004G097100 Sobic002G269100--Sobic004G308900 Sobic002G269100--Sobic002G358300 Sobic002G269100--Sobic009G194400 Sobic004G229500 Sobic004G229500 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic004G169200--Sobic002G395300 Sobic004G169200--Sobic002G358300 Sobic003G428700 Sobic003G428700 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G169200--Sobic004G191400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic004G191400--Sobic004G191300 Sobic001G079300 Sobic001G079300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic004G191400--Sobic007G122800 Sobic003G228900 Sobic003G228900 Sobic004G191400--Sobic003G228900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G191400--Sobic004G294400 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic005G013500 Sobic005G013500 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic001G195200--Sobic004G294400 Sobic001G195200--Sobic001G256700 Sobic001G195200--Sobic004G308900 Sobic001G195200--Sobic002G358300 Sobic001G195200--Sobic007G122800 Sobic004G004500 Sobic004G004500 Sobic001G195200--Sobic004G004500 Sobic004G108200 Sobic004G108200 Sobic001G195200--Sobic004G108200 Sobic001G195200--Sobic002G395300 Sobic001G195200--Sobic004G191300
Octagon: transcription factors


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