Gene annotation
Transcriptome id Sobic.002G269100.1
Synonym ATCBF3, CBF3, DREB1A, Sb02g030310, dehydration response element binding (DREB) transcription factor, SbERF26, (SbDREB1);ethylene response factor 26
Functional annotation "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. " (PubMedID : 24086146)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5X625 , K4GNZ1 , K4GNN8 , X2JUU2
Pfam PF00847
Panther DB PTHR31839 PTHR31839:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G51990 : C-repeat-binding factor 4
RAP-DB (Rice) LOC_Os09g35020.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014382 , Zm00025a014384 , Zm00025a047706 , Zm00025a047703 , Zm00025a033640 , Zm00025a025847
Brachypodium KQJ91104 , KQJ91109 , PNT64988 , KQJ91103 , KQK11455
Barley HORVU5Hr1G041600.1 , HORVU5Hr1G080420.1 , HORVU5Hr1G080430.1 , HORVU5Hr1G080440.3 , HORVU5Hr1G080440.2 , HORVU5Hr1G080440.4 , HORVU5Hr1G080240.1 , HORVU5Hr1G080380.1 , HORVU5Hr1G080340.1 , HORVU5Hr1G080340.2
Wheat TraesCS5D02G317000 , TraesCS6A02G186400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
2 Sobic.004G246600 expressed protein -
3 Sobic.004G295600 AP2 domain containing protein, expressed -
4 Sobic.004G097100 F-box family protein, putative, expressed -
5 Sobic.004G308900 AP2 domain containing protein, expressed -
6 Sobic.002G358300 expressed protein -
7 Sobic.009G194400 expressed protein -
8 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
9 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
10 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
11 Sobic.001G100501 - -
12 Sobic.005G013500 WRKY52, expressed -
13 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
14 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
15 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.003G323201 - -
18 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.007G122800 expressed protein -


Gene co-expression network
sample Sobic002G269100 Sobic002G269100 Sobic001G143100 Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic004G246600 Sobic004G246600 Sobic002G269100--Sobic004G246600 Sobic004G295600 Sobic004G295600 Sobic002G269100--Sobic004G295600 Sobic004G097100 Sobic004G097100 Sobic002G269100--Sobic004G097100 Sobic004G308900 Sobic004G308900 Sobic002G269100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic004G229500 Sobic004G229500 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic001G143100--Sobic002G269100 Sobic001G143100--Sobic004G246600 Sobic001G143100--Sobic004G229500 Sobic007G148500 Sobic007G148500 Sobic001G143100--Sobic007G148500 Sobic001G143100--Sobic004G308900 Sobic001G143100--Sobic002G358300 Sobic001G143100--Sobic004G295600 Sobic001G143100--Sobic004G097100 Sobic005G013500 Sobic005G013500 Sobic001G143100--Sobic005G013500 Sobic004G246600--Sobic004G229500 Sobic009G032000 Sobic009G032000 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic004G295600--Sobic002G269100 Sobic004G295600--Sobic001G143100 Sobic002G388800 Sobic002G388800 Sobic004G295600--Sobic002G388800 Sobic004G295600--Sobic006G187900 Sobic001G311900 Sobic001G311900 Sobic004G295600--Sobic001G311900 Sobic004G295600--Sobic004G229500 Sobic005G180500 Sobic005G180500 Sobic004G295600--Sobic005G180500 Sobic010G104300 Sobic010G104300 Sobic004G295600--Sobic010G104300 Sobic004G295600--Sobic004G246600 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G097100--Sobic004G229500 Sobic004G097100--Sobic004G246600 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic004G097100--Sobic005G013500 Sobic002G388900 Sobic002G388900 Sobic004G097100--Sobic002G388900 Sobic004G097100--Sobic004G308900 Sobic004G097100--Sobic002G184300 Sobic004G308900--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic004G308900--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic004G308900--Sobic001G195200 Sobic001G256700 Sobic001G256700 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G395300 Sobic002G395300 Sobic002G358300--Sobic002G395300 Sobic004G294400 Sobic004G294400 Sobic002G358300--Sobic004G294400 Sobic010G196600 Sobic010G196600 Sobic009G194400--Sobic010G196600 Sobic001G425500 Sobic001G425500 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic001G425600 Sobic001G425600 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic004G092800 Sobic004G092800 Sobic009G194400--Sobic004G092800 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic009G183900 Sobic009G183900 Sobic004G229500--Sobic009G183900 Sobic009G205500 Sobic009G205500 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic006G187900--Sobic004G097100 Sobic006G187900--Sobic004G229500 Sobic006G187900--Sobic005G013500 Sobic006G187900--Sobic004G246600 Sobic006G187900--Sobic002G269100 Sobic001G035100 Sobic001G035100 Sobic006G187900--Sobic001G035100 Sobic006G187900--Sobic009G183900 Sobic006G187900--Sobic004G295600 Sobic006G187900--Sobic002G184300
Octagon: transcription factors


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