Gene annotation
Transcriptome id Sobic.001G138200.1
Synonym PARVUS, GLZ1, GATL1, ATGATL1, Sb01g012060
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5WPN9
Pfam PF01501
Panther DB PTHR13778:SF6 PTHR13778
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G50760 : galacturonosyltransferase-like 2
RAP-DB (Rice) LOC_Os03g47530.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049392 , Zm00025a048973 , Zm00025a007479
Brachypodium KQK21598 , KQK13797
Barley HORVU4Hr1G003590.1 , HORVU4Hr1G003590.2 , HORVU2Hr1G091280.1 , HORVU2Hr1G091280.2 , HORVU4Hr1G042240.2 , HORVU4Hr1G042240.1 , HORVU0Hr1G005260.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.001G100501 - -
3 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
4 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.004G246600 expressed protein -
6 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
7 Sobic.004G097100 F-box family protein, putative, expressed -
8 Sobic.003G207900 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
9 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
10 Sobic.004G295600 AP2 domain containing protein, expressed -
11 Sobic.009G194400 expressed protein -
12 Sobic.004G032300 OsSGL(Ortholog in rice:Wang et al. (2016))(PubMedID : 31659876)@DUF1645 domain containing protein, putative, expressed -
13 Sobic.001G399900 COBRA-like protein 7 precursor, putative, expressed -
14 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
16 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
18 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
20 Sobic.010G234000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic001G138200 Sobic001G138200 Sobic002G269100 Sobic002G269100 Sobic001G138200--Sobic002G269100 Sobic001G100501 Sobic001G100501 Sobic001G138200--Sobic001G100501 Sobic002G388800 Sobic002G388800 Sobic001G138200--Sobic002G388800 Sobic002G225700 Sobic002G225700 Sobic001G138200--Sobic002G225700 Sobic004G246600 Sobic004G246600 Sobic001G138200--Sobic004G246600 Sobic001G295700 Sobic001G295700 Sobic001G138200--Sobic001G295700 Sobic004G097100 Sobic004G097100 Sobic001G138200--Sobic004G097100 Sobic003G207900 Sobic003G207900 Sobic001G138200--Sobic003G207900 Sobic001G143100 Sobic001G143100 Sobic001G138200--Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic004G295600 Sobic004G295600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic004G308900 Sobic004G308900 Sobic002G269100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic004G229500 Sobic004G229500 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic001G100501--Sobic004G097100 Sobic001G100501--Sobic003G207900 Sobic003G230100 Sobic003G230100 Sobic001G100501--Sobic003G230100 Sobic001G100501--Sobic002G269100 Sobic006G216700 Sobic006G216700 Sobic001G100501--Sobic006G216700 Sobic001G100501--Sobic001G295700 Sobic001G100501--Sobic002G225700 Sobic009G136400 Sobic009G136400 Sobic001G100501--Sobic009G136400 Sobic001G100501--Sobic001G138200 Sobic004G263100 Sobic004G263100 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic004G092800 Sobic004G092800 Sobic002G388800--Sobic004G092800 Sobic001G065900 Sobic001G065900 Sobic002G388800--Sobic001G065900 Sobic001G381400 Sobic001G381400 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G102132 Sobic002G102132 Sobic002G388800--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic002G388800--Sobic007G159100 Sobic004G251800 Sobic004G251800 Sobic002G388800--Sobic004G251800 Sobic002G225700--Sobic001G100501 Sobic007G122500 Sobic007G122500 Sobic002G225700--Sobic007G122500 Sobic010G104300 Sobic010G104300 Sobic002G225700--Sobic010G104300 Sobic006G163401 Sobic006G163401 Sobic002G225700--Sobic006G163401 Sobic002G225700--Sobic002G269100 Sobic002G225700--Sobic004G295600 Sobic002G225700--Sobic001G138200 Sobic002G225700--Sobic002G388800 Sobic006G000800 Sobic006G000800 Sobic002G225700--Sobic006G000800 Sobic004G246600--Sobic004G229500 Sobic009G032000 Sobic009G032000 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic005G013500 Sobic005G013500 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic001G295700--Sobic002G358300 Sobic001G259700 Sobic001G259700 Sobic001G295700--Sobic001G259700 Sobic001G295700--Sobic002G269100 Sobic001G295700--Sobic004G308900 Sobic001G295700--Sobic004G097100 Sobic001G295700--Sobic001G100501 Sobic002G395300 Sobic002G395300 Sobic001G295700--Sobic002G395300 Sobic004G169200 Sobic004G169200 Sobic001G295700--Sobic004G169200 Sobic001G295700--Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G097100--Sobic004G229500 Sobic004G097100--Sobic004G246600 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic004G097100--Sobic005G013500 Sobic002G388900 Sobic002G388900 Sobic004G097100--Sobic002G388900 Sobic004G097100--Sobic004G308900 Sobic004G097100--Sobic002G184300 Sobic003G207900--Sobic001G100501 Sobic006G170000 Sobic006G170000 Sobic003G207900--Sobic006G170000 Sobic003G207900--Sobic001G295700 Sobic003G207900--Sobic004G092800 Sobic003G370600 Sobic003G370600 Sobic003G207900--Sobic003G370600 Sobic003G207900--Sobic001G138200 Sobic003G207900--Sobic004G097100 Sobic003G207900--Sobic009G136400 Sobic007G118301 Sobic007G118301 Sobic003G207900--Sobic007G118301 Sobic001G143100--Sobic002G269100 Sobic001G143100--Sobic004G246600 Sobic001G143100--Sobic004G229500 Sobic007G148500 Sobic007G148500 Sobic001G143100--Sobic007G148500 Sobic001G143100--Sobic004G308900 Sobic001G143100--Sobic002G358300 Sobic001G143100--Sobic004G295600 Sobic001G143100--Sobic004G097100 Sobic001G143100--Sobic005G013500
Octagon: transcription factors


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