Gene annotation
Transcriptome id Sobic.004G032300.1
Synonym Sb04g002800
Functional annotation OsSGL(Ortholog in rice:Wang et al. (2016)) (PubMedID : 31659876)
DUF1645 domain containing protein, putative, expressed
UniProt A0A194YMJ8
Pfam PF07816
Panther DB PTHR33095
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70420 : Protein of unknown function (DUF1645)
RAP-DB (Rice) LOC_Os02g04130.1 : DUF1645 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035007
Brachypodium -
Barley -
Wheat TraesCS7B02G432000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
2 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
4 Sobic.006G274300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
6 Sobic.005G037000 cytochrome P450, putative, expressed -
7 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
8 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.007G126300 spotted leaf 11, putative, expressed -
13 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G416500 SRC2 protein, putative, expressed -
16 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
17 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
20 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G032300 Sobic004G032300 Sobic010G234000 Sobic010G234000 Sobic004G032300--Sobic010G234000 Sobic007G122500 Sobic007G122500 Sobic004G032300--Sobic007G122500 Sobic001G035000 Sobic001G035000 Sobic004G032300--Sobic001G035000 Sobic006G274300 Sobic006G274300 Sobic004G032300--Sobic006G274300 Sobic006G273800 Sobic006G273800 Sobic004G032300--Sobic006G273800 Sobic005G037000 Sobic005G037000 Sobic004G032300--Sobic005G037000 Sobic001G441100 Sobic001G441100 Sobic004G032300--Sobic001G441100 Sobic009G217500 Sobic009G217500 Sobic004G032300--Sobic009G217500 Sobic009G217600 Sobic009G217600 Sobic004G032300--Sobic009G217600 Sobic010G234000--Sobic004G032300 Sobic010G234000--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic010G234000--Sobic010G023200 Sobic008G042900 Sobic008G042900 Sobic010G234000--Sobic008G042900 Sobic007G077200 Sobic007G077200 Sobic010G234000--Sobic007G077200 Sobic010G234000--Sobic009G217500 Sobic003G416500 Sobic003G416500 Sobic010G234000--Sobic003G416500 Sobic010G234000--Sobic007G122500 Sobic010G234000--Sobic005G037000 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic007G122500--Sobic005G037000 Sobic007G122500--Sobic004G032300 Sobic009G120800 Sobic009G120800 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G126300 Sobic007G126300 Sobic007G122500--Sobic007G126300 Sobic006G187900 Sobic006G187900 Sobic007G122500--Sobic006G187900 Sobic007G122500--Sobic009G217600 Sobic001G035000--Sobic001G441100 Sobic001G077400 Sobic001G077400 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G341600 Sobic001G341600 Sobic001G035000--Sobic001G341600 Sobic001G209800 Sobic001G209800 Sobic001G035000--Sobic001G209800 Sobic001G035000--Sobic007G122500 Sobic001G035000--Sobic007G126300 Sobic004G280900 Sobic004G280900 Sobic001G035000--Sobic004G280900 Sobic006G274300--Sobic001G209800 Sobic006G274300--Sobic001G035000 Sobic006G274300--Sobic004G032300 Sobic006G274300--Sobic005G037000 Sobic006G274300--Sobic001G077400 Sobic006G274300--Sobic006G273800 Sobic006G274300--Sobic009G217600 Sobic006G274300--Sobic001G441100 Sobic006G274300--Sobic007G126300 Sobic006G273800--Sobic009G217500 Sobic006G273800--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G273800--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic006G273800--Sobic003G341100 Sobic001G370600 Sobic001G370600 Sobic006G273800--Sobic001G370600 Sobic006G273800--Sobic003G416500 Sobic001G064900 Sobic001G064900 Sobic006G273800--Sobic001G064900 Sobic006G273800--Sobic001G035000 Sobic006G273800--Sobic010G234000 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic005G037000--Sobic007G126300 Sobic001G259600 Sobic001G259600 Sobic005G037000--Sobic001G259600 Sobic006G165100 Sobic006G165100 Sobic005G037000--Sobic006G165100 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic002G278500 Sobic002G278500 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic002G140300 Sobic002G140300 Sobic001G441100--Sobic002G140300 Sobic009G217500--Sobic006G273800 Sobic009G217500--Sobic007G077100 Sobic009G217500--Sobic003G341100 Sobic009G217500--Sobic010G023200 Sobic010G102000 Sobic010G102000 Sobic009G217500--Sobic010G102000 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic009G217500--Sobic001G035000 Sobic009G217500--Sobic001G064900 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500
Octagon: transcription factors


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