Gene annotation
Transcriptome id Sobic.010G234000.1
Synonym Sb10g027610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
EF hand family protein, putative, expressed
UniProt C5Z878
Pfam PF13833
Panther DB PTHR10891 PTHR10891:SF624
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46600 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os06g46950.1 : EF hand family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018160
Brachypodium KQK17210
Barley HORVU7Hr1G101740.2 , HORVU7Hr1G101740.3 , HORVU7Hr1G101740.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G032300 OsSGL(Ortholog in rice:Wang et al. (2016))(PubMedID : 31659876)@DUF1645 domain containing protein, putative, expressed -
2 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
3 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.003G416500 SRC2 protein, putative, expressed -
8 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.005G037000 cytochrome P450, putative, expressed -
10 Sobic.006G274300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.001G538866 - -
12 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
13 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.007G126300 spotted leaf 11, putative, expressed -
17 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
19 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
20 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -


Gene co-expression network
sample Sobic010G234000 Sobic010G234000 Sobic004G032300 Sobic004G032300 Sobic010G234000--Sobic004G032300 Sobic006G273800 Sobic006G273800 Sobic010G234000--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic010G234000--Sobic010G023200 Sobic008G042900 Sobic008G042900 Sobic010G234000--Sobic008G042900 Sobic007G077200 Sobic007G077200 Sobic010G234000--Sobic007G077200 Sobic009G217500 Sobic009G217500 Sobic010G234000--Sobic009G217500 Sobic003G416500 Sobic003G416500 Sobic010G234000--Sobic003G416500 Sobic007G122500 Sobic007G122500 Sobic010G234000--Sobic007G122500 Sobic005G037000 Sobic005G037000 Sobic010G234000--Sobic005G037000 Sobic004G032300--Sobic010G234000 Sobic004G032300--Sobic007G122500 Sobic001G035000 Sobic001G035000 Sobic004G032300--Sobic001G035000 Sobic006G274300 Sobic006G274300 Sobic004G032300--Sobic006G274300 Sobic004G032300--Sobic006G273800 Sobic004G032300--Sobic005G037000 Sobic001G441100 Sobic001G441100 Sobic004G032300--Sobic001G441100 Sobic004G032300--Sobic009G217500 Sobic009G217600 Sobic009G217600 Sobic004G032300--Sobic009G217600 Sobic006G273800--Sobic009G217500 Sobic006G273800--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G273800--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic006G273800--Sobic003G341100 Sobic001G370600 Sobic001G370600 Sobic006G273800--Sobic001G370600 Sobic006G273800--Sobic003G416500 Sobic001G064900 Sobic001G064900 Sobic006G273800--Sobic001G064900 Sobic006G273800--Sobic001G035000 Sobic006G273800--Sobic010G234000 Sobic010G023200--Sobic007G077100 Sobic010G023200--Sobic009G217500 Sobic010G023200--Sobic003G416500 Sobic010G023200--Sobic006G273800 Sobic006G259000 Sobic006G259000 Sobic010G023200--Sobic006G259000 Sobic010G071000 Sobic010G071000 Sobic010G023200--Sobic010G071000 Sobic010G023200--Sobic003G341100 Sobic010G023200--Sobic001G064900 Sobic001G489500 Sobic001G489500 Sobic010G023200--Sobic001G489500 Sobic001G341600 Sobic001G341600 Sobic008G042900--Sobic001G341600 Sobic008G042900--Sobic009G217600 Sobic008G042900--Sobic001G441100 Sobic002G140300 Sobic002G140300 Sobic008G042900--Sobic002G140300 Sobic002G131800 Sobic002G131800 Sobic008G042900--Sobic002G131800 Sobic004G280900 Sobic004G280900 Sobic008G042900--Sobic004G280900 Sobic009G027900 Sobic009G027900 Sobic008G042900--Sobic009G027900 Sobic006G066200 Sobic006G066200 Sobic008G042900--Sobic006G066200 Sobic001G077400 Sobic001G077400 Sobic008G042900--Sobic001G077400 Sobic001G259600 Sobic001G259600 Sobic007G077200--Sobic001G259600 Sobic007G077200--Sobic007G077100 Sobic010G209100 Sobic010G209100 Sobic007G077200--Sobic010G209100 Sobic007G077200--Sobic010G023200 Sobic007G077200--Sobic009G217500 Sobic003G324400 Sobic003G324400 Sobic007G077200--Sobic003G324400 Sobic007G077200--Sobic001G035000 Sobic001G040200 Sobic001G040200 Sobic007G077200--Sobic001G040200 Sobic006G263600 Sobic006G263600 Sobic007G077200--Sobic006G263600 Sobic009G217500--Sobic006G273800 Sobic009G217500--Sobic007G077100 Sobic009G217500--Sobic003G341100 Sobic009G217500--Sobic010G023200 Sobic010G102000 Sobic010G102000 Sobic009G217500--Sobic010G102000 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic009G217500--Sobic001G035000 Sobic009G217500--Sobic001G064900 Sobic003G416500--Sobic001G489500 Sobic003G416500--Sobic010G023200 Sobic003G416500--Sobic006G259000 Sobic003G416500--Sobic007G077100 Sobic003G416500--Sobic009G217500 Sobic003G416500--Sobic006G273800 Sobic009G120800 Sobic009G120800 Sobic003G416500--Sobic009G120800 Sobic002G323900 Sobic002G323900 Sobic003G416500--Sobic002G323900 Sobic010G105300 Sobic010G105300 Sobic003G416500--Sobic010G105300 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic007G122500--Sobic005G037000 Sobic007G122500--Sobic004G032300 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G126300 Sobic007G126300 Sobic007G122500--Sobic007G126300 Sobic006G187900 Sobic006G187900 Sobic007G122500--Sobic006G187900 Sobic007G122500--Sobic009G217600 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic001G209800 Sobic001G209800 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic005G037000--Sobic007G126300 Sobic005G037000--Sobic001G259600 Sobic006G165100 Sobic006G165100 Sobic005G037000--Sobic006G165100
Octagon: transcription factors


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