Gene annotation
Transcriptome id Sobic.001G206600.1
Synonym Sb01g018270
Functional annotation vacuolar protein-sorting protein bro1, putative, expressed
UniProt A0A1B6QJZ8
Pfam PF03097
Panther DB PTHR23030
NCBI CDD -
KEGG Orthology K12200; PDCD6IP, ALIX, programmed cell death 6-interacting protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15130 : Endosomal targeting BRO1-like domain-containing protein
RAP-DB (Rice) LOC_Os10g35250.1 : vacuolar protein-sorting protein bro1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G013400 WRKY52, expressed -
2 Sobic.009G123733 - -
3 Sobic.001G026950 - -
4 Sobic.004G251800 leaf senescence related protein, putative, expressed -
5 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
6 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
7 Sobic.005G013500 WRKY52, expressed -
8 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G246600 expressed protein -
11 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
12 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
13 Sobic.007G181500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Dehydration-responsive element binding 1 A(PubMedID : 26320239)@Up-reguralion under heat(PubMedID : 24916767)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
14 Sobic.003G376300 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
15 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
17 Sobic.002G245200 beta-expansin precursor, putative, expressed -
18 Sobic.009G201400 glycosyl hydrolases family 17, putative, expressed -
19 Sobic.004G352000 cytochrome P450, putative, expressed -
20 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -


Gene co-expression network
sample Sobic001G206600 Sobic001G206600 Sobic005G013400 Sobic005G013400 Sobic001G206600--Sobic005G013400 Sobic009G123733 Sobic009G123733 Sobic001G206600--Sobic009G123733 Sobic001G026950 Sobic001G026950 Sobic001G206600--Sobic001G026950 Sobic004G251800 Sobic004G251800 Sobic001G206600--Sobic004G251800 Sobic003G370600 Sobic003G370600 Sobic001G206600--Sobic003G370600 Sobic001G143100 Sobic001G143100 Sobic001G206600--Sobic001G143100 Sobic005G013500 Sobic005G013500 Sobic001G206600--Sobic005G013500 Sobic006G170000 Sobic006G170000 Sobic001G206600--Sobic006G170000 Sobic002G250900 Sobic002G250900 Sobic001G206600--Sobic002G250900 Sobic005G013400--Sobic005G013500 Sobic005G013400--Sobic001G206600 Sobic004G246600 Sobic004G246600 Sobic005G013400--Sobic004G246600 Sobic007G148500 Sobic007G148500 Sobic005G013400--Sobic007G148500 Sobic004G229500 Sobic004G229500 Sobic005G013400--Sobic004G229500 Sobic005G013400--Sobic003G370600 Sobic005G013400--Sobic009G123733 Sobic005G013400--Sobic001G143100 Sobic003G060100 Sobic003G060100 Sobic005G013400--Sobic003G060100 Sobic004G092800 Sobic004G092800 Sobic009G123733--Sobic004G092800 Sobic009G123733--Sobic004G251800 Sobic001G187400 Sobic001G187400 Sobic009G123733--Sobic001G187400 Sobic005G050032 Sobic005G050032 Sobic009G123733--Sobic005G050032 Sobic004G263100 Sobic004G263100 Sobic009G123733--Sobic004G263100 Sobic002G388800 Sobic002G388800 Sobic009G123733--Sobic002G388800 Sobic009G123733--Sobic005G013400 Sobic002G390000 Sobic002G390000 Sobic009G123733--Sobic002G390000 Sobic008G079500 Sobic008G079500 Sobic009G123733--Sobic008G079500 Sobic002G391501 Sobic002G391501 Sobic001G026950--Sobic002G391501 Sobic010G203800 Sobic010G203800 Sobic001G026950--Sobic010G203800 Sobic008G141501 Sobic008G141501 Sobic001G026950--Sobic008G141501 Sobic001G026950--Sobic009G123733 Sobic001G026950--Sobic001G206600 Sobic001G026950--Sobic008G079500 Sobic001G026950--Sobic005G013400 Sobic001G026950--Sobic004G251800 Sobic007G159100 Sobic007G159100 Sobic001G026950--Sobic007G159100 Sobic001G065900 Sobic001G065900 Sobic004G251800--Sobic001G065900 Sobic004G251800--Sobic004G263100 Sobic004G251800--Sobic002G388800 Sobic004G251800--Sobic003G060100 Sobic004G094900 Sobic004G094900 Sobic004G251800--Sobic004G094900 Sobic002G100832 Sobic002G100832 Sobic004G251800--Sobic002G100832 Sobic004G251800--Sobic004G092800 Sobic004G251800--Sobic002G390000 Sobic006G057500 Sobic006G057500 Sobic004G251800--Sobic006G057500 Sobic003G370600--Sobic006G170000 Sobic004G352000 Sobic004G352000 Sobic003G370600--Sobic004G352000 Sobic009G194400 Sobic009G194400 Sobic003G370600--Sobic009G194400 Sobic001G256700 Sobic001G256700 Sobic003G370600--Sobic001G256700 Sobic003G370600--Sobic004G092800 Sobic003G370600--Sobic004G246600 Sobic009G144700 Sobic009G144700 Sobic003G370600--Sobic009G144700 Sobic004G004500 Sobic004G004500 Sobic003G370600--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic003G370600--Sobic002G388900 Sobic002G269100 Sobic002G269100 Sobic001G143100--Sobic002G269100 Sobic001G143100--Sobic004G246600 Sobic001G143100--Sobic004G229500 Sobic001G143100--Sobic007G148500 Sobic004G308900 Sobic004G308900 Sobic001G143100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G143100--Sobic002G358300 Sobic004G295600 Sobic004G295600 Sobic001G143100--Sobic004G295600 Sobic004G097100 Sobic004G097100 Sobic001G143100--Sobic004G097100 Sobic001G143100--Sobic005G013500 Sobic005G013500--Sobic004G229500 Sobic009G183900 Sobic009G183900 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic009G032000 Sobic009G032000 Sobic005G013500--Sobic009G032000 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic004G294400 Sobic004G294400 Sobic005G013500--Sobic004G294400 Sobic004G108200 Sobic004G108200 Sobic005G013500--Sobic004G108200 Sobic006G170000--Sobic003G370600 Sobic006G170000--Sobic004G352000 Sobic006G170000--Sobic001G256700 Sobic006G170000--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic006G170000--Sobic008G187001 Sobic006G170000--Sobic004G246600 Sobic006G170000--Sobic004G092800 Sobic006G170000--Sobic002G388900 Sobic006G170000--Sobic009G194400 Sobic002G250900--Sobic002G388800 Sobic002G250900--Sobic009G194400 Sobic002G250900--Sobic001G143100 Sobic002G250900--Sobic003G060100 Sobic002G250900--Sobic003G370600 Sobic002G250900--Sobic002G269100 Sobic002G250900--Sobic004G097100 Sobic002G250900--Sobic004G092800 Sobic002G250900--Sobic001G065900
Octagon: transcription factors


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