Gene annotation
Transcriptome id Sobic.002G248201.1
Synonym -
Functional annotation -
UniProt A0A1B6QDC2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G190500 expressed protein -
2 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G430600 cytochrome P450, putative, expressed -
4 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
5 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
8 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
9 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
10 Sobic.009G066800 - -
11 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
12 Sobic.009G077500 gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
13 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
15 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
16 Sobic.003G145400 expressed protein -
17 Sobic.009G179500 expressed protein -
18 Sobic.003G085750 - -
19 Sobic.010G225251 - -
20 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G248201 Sobic002G248201 Sobic006G190500 Sobic006G190500 Sobic002G248201--Sobic006G190500 Sobic008G050500 Sobic008G050500 Sobic002G248201--Sobic008G050500 Sobic001G430600 Sobic001G430600 Sobic002G248201--Sobic001G430600 Sobic006G190100 Sobic006G190100 Sobic002G248201--Sobic006G190100 Sobic006G253700 Sobic006G253700 Sobic002G248201--Sobic006G253700 Sobic009G111200 Sobic009G111200 Sobic002G248201--Sobic009G111200 Sobic007G213800 Sobic007G213800 Sobic002G248201--Sobic007G213800 Sobic004G286600 Sobic004G286600 Sobic002G248201--Sobic004G286600 Sobic003G313800 Sobic003G313800 Sobic002G248201--Sobic003G313800 Sobic006G230800 Sobic006G230800 Sobic006G190500--Sobic006G230800 Sobic003G123600 Sobic003G123600 Sobic006G190500--Sobic003G123600 Sobic006G190500--Sobic006G190100 Sobic002G415600 Sobic002G415600 Sobic006G190500--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic006G190500--Sobic006G230900 Sobic006G190500--Sobic009G111200 Sobic010G217800 Sobic010G217800 Sobic006G190500--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G190500--Sobic003G144700 Sobic010G220200 Sobic010G220200 Sobic006G190500--Sobic010G220200 Sobic009G065500 Sobic009G065500 Sobic008G050500--Sobic009G065500 Sobic009G164600 Sobic009G164600 Sobic008G050500--Sobic009G164600 Sobic001G325000 Sobic001G325000 Sobic008G050500--Sobic001G325000 Sobic001G481500 Sobic001G481500 Sobic008G050500--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic008G050500--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic008G050500--Sobic001G397200 Sobic007G166000 Sobic007G166000 Sobic008G050500--Sobic007G166000 Sobic004G336500 Sobic004G336500 Sobic008G050500--Sobic004G336500 Sobic004G166200 Sobic004G166200 Sobic008G050500--Sobic004G166200 Sobic002G347100 Sobic002G347100 Sobic001G430600--Sobic002G347100 Sobic001G430600--Sobic007G166000 Sobic001G430600--Sobic008G050500 Sobic001G430600--Sobic002G248201 Sobic001G430600--Sobic001G481500 Sobic001G430600--Sobic010G032100 Sobic003G202000 Sobic003G202000 Sobic001G430600--Sobic003G202000 Sobic001G525200 Sobic001G525200 Sobic001G430600--Sobic001G525200 Sobic005G005600 Sobic005G005600 Sobic001G430600--Sobic005G005600 Sobic001G443800 Sobic001G443800 Sobic006G190100--Sobic001G443800 Sobic001G138600 Sobic001G138600 Sobic006G190100--Sobic001G138600 Sobic006G190100--Sobic006G190500 Sobic006G190100--Sobic007G213800 Sobic002G261200 Sobic002G261200 Sobic006G190100--Sobic002G261200 Sobic003G148600 Sobic003G148600 Sobic006G190100--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic006G190100--Sobic001G371800 Sobic001G391500 Sobic001G391500 Sobic006G190100--Sobic001G391500 Sobic010G198600 Sobic010G198600 Sobic006G190100--Sobic010G198600 Sobic003G043550 Sobic003G043550 Sobic006G253700--Sobic003G043550 Sobic006G253700--Sobic002G248201 Sobic007G122866 Sobic007G122866 Sobic006G253700--Sobic007G122866 Sobic003G085750 Sobic003G085750 Sobic006G253700--Sobic003G085750 Sobic001G052500 Sobic001G052500 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic007G085600 Sobic007G085600 Sobic006G253700--Sobic007G085600 Sobic010G072200 Sobic010G072200 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic009G111200--Sobic003G123600 Sobic005G010200 Sobic005G010200 Sobic009G111200--Sobic005G010200 Sobic006G231200 Sobic006G231200 Sobic009G111200--Sobic006G231200 Sobic005G103500 Sobic005G103500 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic007G213800--Sobic003G144700 Sobic007G213800--Sobic001G391500 Sobic002G282300 Sobic002G282300 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic003G197200 Sobic003G197200 Sobic007G213800--Sobic003G197200 Sobic007G213800--Sobic001G138600 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic001G459800 Sobic001G459800 Sobic007G213800--Sobic001G459800 Sobic008G177800 Sobic008G177800 Sobic004G286600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G286600--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic004G286600--Sobic002G294700 Sobic001G077700 Sobic001G077700 Sobic004G286600--Sobic001G077700 Sobic010G234600 Sobic010G234600 Sobic004G286600--Sobic010G234600 Sobic002G036100 Sobic002G036100 Sobic004G286600--Sobic002G036100 Sobic002G248100 Sobic002G248100 Sobic004G286600--Sobic002G248100 Sobic006G179500 Sobic006G179500 Sobic004G286600--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic004G286600--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic003G313800--Sobic001G259600 Sobic009G179500 Sobic009G179500 Sobic003G313800--Sobic009G179500 Sobic003G313800--Sobic007G213800 Sobic003G313800--Sobic002G282300 Sobic003G324400 Sobic003G324400 Sobic003G313800--Sobic003G324400 Sobic003G313800--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic003G313800--Sobic001G077400 Sobic006G165100 Sobic006G165100 Sobic003G313800--Sobic006G165100 Sobic005G037000 Sobic005G037000 Sobic003G313800--Sobic005G037000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.