Gene annotation
Transcriptome id Sobic.009G066800.1
Synonym
Functional annotation -
UniProt A0A1B6P797
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G036150 - -
2 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
5 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
6 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
8 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
9 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
10 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
11 Sobic.008G074900 - -
12 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
13 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
14 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
15 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
16 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
18 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.004G333900 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
20 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic009G066800 Sobic009G066800 Sobic002G036150 Sobic002G036150 Sobic009G066800--Sobic002G036150 Sobic005G010200 Sobic005G010200 Sobic009G066800--Sobic005G010200 Sobic010G200700 Sobic010G200700 Sobic009G066800--Sobic010G200700 Sobic009G247300 Sobic009G247300 Sobic009G066800--Sobic009G247300 Sobic002G036100 Sobic002G036100 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic006G089300 Sobic006G089300 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic002G359300 Sobic002G359300 Sobic009G066800--Sobic002G359300 Sobic002G036150--Sobic002G036100 Sobic002G036150--Sobic009G066800 Sobic002G036150--Sobic009G247300 Sobic002G036150--Sobic005G010200 Sobic002G036150--Sobic002G359300 Sobic003G158500 Sobic003G158500 Sobic002G036150--Sobic003G158500 Sobic009G036100 Sobic009G036100 Sobic002G036150--Sobic009G036100 Sobic001G040200 Sobic001G040200 Sobic002G036150--Sobic001G040200 Sobic008G177800 Sobic008G177800 Sobic002G036150--Sobic008G177800 Sobic010G220200 Sobic010G220200 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic006G190500 Sobic006G190500 Sobic005G010200--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic005G010200--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic005G010200--Sobic002G415600 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic004G297200 Sobic004G297200 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic006G228300 Sobic006G228300 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic010G200700--Sobic009G066800 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic009G247300--Sobic002G036100 Sobic009G247300--Sobic009G066800 Sobic009G247300--Sobic004G297200 Sobic001G259600 Sobic001G259600 Sobic009G247300--Sobic001G259600 Sobic009G247300--Sobic001G040200 Sobic002G174200 Sobic002G174200 Sobic009G247300--Sobic002G174200 Sobic009G247300--Sobic006G089300 Sobic009G247300--Sobic010G200700 Sobic004G286600 Sobic004G286600 Sobic009G247300--Sobic004G286600 Sobic001G077400 Sobic001G077400 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic006G230800 Sobic006G230800 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic003G123600 Sobic003G123600 Sobic009G111200--Sobic003G123600 Sobic009G111200--Sobic005G010200 Sobic006G231200 Sobic006G231200 Sobic009G111200--Sobic006G231200 Sobic005G103500 Sobic005G103500 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic006G089300--Sobic001G040200 Sobic006G089300--Sobic002G359300 Sobic006G179500 Sobic006G179500 Sobic006G089300--Sobic006G179500 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic006G089300--Sobic010G200700 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic009G046600 Sobic009G046600 Sobic010G041700--Sobic009G046600 Sobic010G041700--Sobic005G010200 Sobic010G041700--Sobic006G089300 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic010G041700--Sobic009G066800 Sobic010G041700--Sobic009G129000 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900 Sobic002G359300--Sobic001G040200 Sobic002G359300--Sobic006G179500 Sobic002G359300--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G359300--Sobic006G183400 Sobic002G195900 Sobic002G195900 Sobic002G359300--Sobic002G195900 Sobic003G430400 Sobic003G430400 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic002G359300--Sobic006G089300 Sobic009G183300 Sobic009G183300 Sobic002G359300--Sobic009G183300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.