Gene annotation
Transcriptome id Sobic.004G333900.1
Synonym 1, ATAVP3, AtVHP1, AVP-3, Sb04g036230, AVP1
Functional annotation inorganic H+ pyrophosphatase, putative, expressed
UniProt C5XV28
Pfam PF03030
Panther DB PTHR31998 PTHR31998:SF13
NCBI CDD -
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0016020; membrane GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0004427inorganic diphosphatase activity


Orthologs (automatic annotation)
TAIR AT1G15690 : Inorganic H pyrophosphatase family protein
RAP-DB (Rice) LOC_Os02g55890.1 : inorganic H+ pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a051395 , Zm00025a049815 , Zm00025a036215 , Zm00025a042963
Brachypodium KQK04235
Barley HORVU7Hr1G115540.11 , HORVU7Hr1G115540.10 , HORVU7Hr1G115540.5 , HORVU7Hr1G115540.1 , HORVU7Hr1G115540.3 , HORVU7Hr1G115540.9 , HORVU1Hr1G023100.1 , HORVU1Hr1G023100.2 , HORVU1Hr1G061140.9 , HORVU1Hr1G061140.8 , HORVU1Hr1G061140.3 , HORVU1Hr1G061140.2 , HORVU1Hr1G061140.1 , HORVU1Hr1G061140.7 , HORVU1Hr1G061140.6 , HORVU1Hr1G061140.5 , HORVU1Hr1G061140.4 , HORVU1Hr1G061140.12 , HORVU1Hr1G061140.11 , HORVU1Hr1G061140.10
Wheat TraesCS1B02G124600 , TraesCS1B02G264600 , TraesCS7D02G142600 , TraesCS7D02G142600 , TraesCS7D02G142600 , TraesCS7A02G517700 , TraesCS7A02G517700 , TraesCS1D02G253200 , TraesCS1A02G253600 , TraesCS1A02G107200 , TraesCS1A02G107200 , TraesCS7B02G042600 , TraesCS7B02G042600 , TraesCS1D02G107600
Populus -


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cDNA sequences
Sobic.004G333900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
2 Sobic.008G074900 - -
3 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
4 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
5 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
6 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
7 Sobic.008G151300 expressed protein -
8 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G248100 expressed protein -
10 Sobic.010G225100 DUF640 domain containing protein, putative, expressed -
11 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
12 Sobic.003G387000 expressed protein -
13 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
14 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
15 Sobic.006G231332 - -
16 Sobic.001G424200 protein kinase, putative, expressed -
17 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
19 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -


Gene co-expression network
sample Sobic004G333900 Sobic004G333900 Sobic008G177800 Sobic008G177800 Sobic004G333900--Sobic008G177800 Sobic008G074900 Sobic008G074900 Sobic004G333900--Sobic008G074900 Sobic005G103300 Sobic005G103300 Sobic004G333900--Sobic005G103300 Sobic002G294700 Sobic002G294700 Sobic004G333900--Sobic002G294700 Sobic003G288600 Sobic003G288600 Sobic004G333900--Sobic003G288600 Sobic010G234600 Sobic010G234600 Sobic004G333900--Sobic010G234600 Sobic008G151300 Sobic008G151300 Sobic004G333900--Sobic008G151300 Sobic005G010200 Sobic005G010200 Sobic004G333900--Sobic005G010200 Sobic002G248100 Sobic002G248100 Sobic004G333900--Sobic002G248100 Sobic008G177800--Sobic002G294700 Sobic006G231100 Sobic006G231100 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic002G415600 Sobic002G415600 Sobic008G177800--Sobic002G415600 Sobic010G217800 Sobic010G217800 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic006G230900 Sobic006G230900 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic008G074900--Sobic004G333900 Sobic006G231332 Sobic006G231332 Sobic008G074900--Sobic006G231332 Sobic009G111200 Sobic009G111200 Sobic008G074900--Sobic009G111200 Sobic008G074900--Sobic008G177800 Sobic008G074900--Sobic002G415600 Sobic008G074900--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic008G074900--Sobic010G220200 Sobic005G103500 Sobic005G103500 Sobic008G074900--Sobic005G103500 Sobic009G066800 Sobic009G066800 Sobic008G074900--Sobic009G066800 Sobic002G414600 Sobic002G414600 Sobic005G103300--Sobic002G414600 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic003G387000 Sobic003G387000 Sobic005G103300--Sobic003G387000 Sobic001G252300 Sobic001G252300 Sobic005G103300--Sobic001G252300 Sobic001G097600 Sobic001G097600 Sobic005G103300--Sobic001G097600 Sobic001G119000 Sobic001G119000 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic002G359300 Sobic002G359300 Sobic005G103300--Sobic002G359300 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic006G267200 Sobic006G267200 Sobic003G288600--Sobic006G267200 Sobic003G288600--Sobic010G217800 Sobic003G288600--Sobic010G220200 Sobic003G288600--Sobic006G231100 Sobic003G288600--Sobic008G177800 Sobic009G141800 Sobic009G141800 Sobic003G288600--Sobic009G141800 Sobic003G288600--Sobic002G415600 Sobic001G477300 Sobic001G477300 Sobic003G288600--Sobic001G477300 Sobic003G288600--Sobic005G103300 Sobic010G234700 Sobic010G234700 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic010G234600--Sobic002G248100 Sobic008G151300--Sobic008G177800 Sobic001G516600 Sobic001G516600 Sobic008G151300--Sobic001G516600 Sobic010G262200 Sobic010G262200 Sobic008G151300--Sobic010G262200 Sobic008G151300--Sobic004G333900 Sobic008G151300--Sobic005G010200 Sobic001G513700 Sobic001G513700 Sobic008G151300--Sobic001G513700 Sobic008G151300--Sobic010G234600 Sobic002G272900 Sobic002G272900 Sobic008G151300--Sobic002G272900 Sobic008G151300--Sobic002G294700 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic006G190500 Sobic006G190500 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic005G010200--Sobic002G415600 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic002G248100--Sobic001G077700 Sobic002G248100--Sobic008G177800 Sobic002G248100--Sobic010G234600 Sobic002G248100--Sobic002G294700 Sobic002G248100--Sobic009G071800 Sobic002G248100--Sobic004G286600 Sobic002G203000 Sobic002G203000 Sobic002G248100--Sobic002G203000 Sobic002G248100--Sobic009G255500 Sobic002G248100--Sobic006G231100
Octagon: transcription factors


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