Gene annotation
Transcriptome id Sobic.008G074900.1
Synonym
Functional annotation -
UniProt A0A1B6PBX9
Pfam -
Panther DB PTHR36023 PTHR36023:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G074900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G333900 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
2 Sobic.006G231332 - -
3 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
5 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
8 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
9 Sobic.009G066800 - -
10 Sobic.002G248100 expressed protein -
11 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
12 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
13 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G424200 protein kinase, putative, expressed -
15 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
16 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
18 Sobic.004G048100 expressed protein -
19 Sobic.001G101500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
20 Sobic.008G151300 expressed protein -


Gene co-expression network
sample Sobic008G074900 Sobic008G074900 Sobic004G333900 Sobic004G333900 Sobic008G074900--Sobic004G333900 Sobic006G231332 Sobic006G231332 Sobic008G074900--Sobic006G231332 Sobic009G111200 Sobic009G111200 Sobic008G074900--Sobic009G111200 Sobic008G177800 Sobic008G177800 Sobic008G074900--Sobic008G177800 Sobic002G415600 Sobic002G415600 Sobic008G074900--Sobic002G415600 Sobic005G010200 Sobic005G010200 Sobic008G074900--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic008G074900--Sobic010G220200 Sobic005G103500 Sobic005G103500 Sobic008G074900--Sobic005G103500 Sobic009G066800 Sobic009G066800 Sobic008G074900--Sobic009G066800 Sobic004G333900--Sobic008G177800 Sobic004G333900--Sobic008G074900 Sobic005G103300 Sobic005G103300 Sobic004G333900--Sobic005G103300 Sobic002G294700 Sobic002G294700 Sobic004G333900--Sobic002G294700 Sobic003G288600 Sobic003G288600 Sobic004G333900--Sobic003G288600 Sobic010G234600 Sobic010G234600 Sobic004G333900--Sobic010G234600 Sobic008G151300 Sobic008G151300 Sobic004G333900--Sobic008G151300 Sobic004G333900--Sobic005G010200 Sobic002G248100 Sobic002G248100 Sobic004G333900--Sobic002G248100 Sobic006G231332--Sobic010G234600 Sobic006G231332--Sobic002G415600 Sobic006G231100 Sobic006G231100 Sobic006G231332--Sobic006G231100 Sobic006G231200 Sobic006G231200 Sobic006G231332--Sobic006G231200 Sobic006G231332--Sobic008G177800 Sobic010G217800 Sobic010G217800 Sobic006G231332--Sobic010G217800 Sobic006G231332--Sobic009G111200 Sobic006G230900 Sobic006G230900 Sobic006G231332--Sobic006G230900 Sobic001G424200 Sobic001G424200 Sobic006G231332--Sobic001G424200 Sobic006G190500 Sobic006G190500 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic006G230800 Sobic006G230800 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic003G123600 Sobic003G123600 Sobic009G111200--Sobic003G123600 Sobic009G111200--Sobic005G010200 Sobic009G111200--Sobic006G231200 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic002G415600--Sobic003G144700 Sobic010G234700 Sobic010G234700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic005G010200--Sobic002G415600 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic010G220200--Sobic010G217800 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic010G220200--Sobic006G190500 Sobic010G220200--Sobic006G230800 Sobic010G220200--Sobic003G288600 Sobic010G220200--Sobic006G231100 Sobic010G220200--Sobic008G177800 Sobic010G220200--Sobic006G230900 Sobic001G405500 Sobic001G405500 Sobic005G103500--Sobic001G405500 Sobic001G397200 Sobic001G397200 Sobic005G103500--Sobic001G397200 Sobic005G103500--Sobic005G103300 Sobic005G103500--Sobic001G481600 Sobic007G026600 Sobic007G026600 Sobic005G103500--Sobic007G026600 Sobic001G309600 Sobic001G309600 Sobic005G103500--Sobic001G309600 Sobic008G070350 Sobic008G070350 Sobic005G103500--Sobic008G070350 Sobic003G387000 Sobic003G387000 Sobic005G103500--Sobic003G387000 Sobic006G032700 Sobic006G032700 Sobic005G103500--Sobic006G032700 Sobic002G036150 Sobic002G036150 Sobic009G066800--Sobic002G036150 Sobic009G066800--Sobic005G010200 Sobic010G200700 Sobic010G200700 Sobic009G066800--Sobic010G200700 Sobic009G247300 Sobic009G247300 Sobic009G066800--Sobic009G247300 Sobic002G036100 Sobic002G036100 Sobic009G066800--Sobic002G036100 Sobic009G066800--Sobic009G111200 Sobic006G089300 Sobic006G089300 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic002G359300 Sobic002G359300 Sobic009G066800--Sobic002G359300
Octagon: transcription factors


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