Gene annotation
Transcriptome id Sobic.004G048100.1
Synonym
Functional annotation expressed protein
UniProt A0A194YMT3
Pfam -
Panther DB PTHR37900 PTHR37900:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g06440.1 : expressed protein
MaizeGDB (Corn) Zm00025a034855
Brachypodium KQJ93424
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234700 expressed protein -
2 Sobic.001G424200 protein kinase, putative, expressed -
3 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
5 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G101500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
7 Sobic.006G231332 - -
8 Sobic.008G074900 - -
9 Sobic.004G199300 hypoxia-responsive family protein, putative, expressed -
10 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
12 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
13 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
14 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
15 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
16 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
17 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
18 Sobic.003G327500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
19 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -


Gene co-expression network
sample Sobic004G048100 Sobic004G048100 Sobic010G234700 Sobic010G234700 Sobic004G048100--Sobic010G234700 Sobic001G424200 Sobic001G424200 Sobic004G048100--Sobic001G424200 Sobic002G415600 Sobic002G415600 Sobic004G048100--Sobic002G415600 Sobic010G234600 Sobic010G234600 Sobic004G048100--Sobic010G234600 Sobic010G217800 Sobic010G217800 Sobic004G048100--Sobic010G217800 Sobic001G101500 Sobic001G101500 Sobic004G048100--Sobic001G101500 Sobic006G231332 Sobic006G231332 Sobic004G048100--Sobic006G231332 Sobic008G074900 Sobic008G074900 Sobic004G048100--Sobic008G074900 Sobic004G199300 Sobic004G199300 Sobic004G048100--Sobic004G199300 Sobic010G234700--Sobic010G234600 Sobic010G234700--Sobic002G415600 Sobic010G234700--Sobic004G199300 Sobic001G077700 Sobic001G077700 Sobic010G234700--Sobic001G077700 Sobic010G234700--Sobic010G217800 Sobic006G230900 Sobic006G230900 Sobic010G234700--Sobic006G230900 Sobic008G177800 Sobic008G177800 Sobic010G234700--Sobic008G177800 Sobic003G123600 Sobic003G123600 Sobic010G234700--Sobic003G123600 Sobic006G190500 Sobic006G190500 Sobic010G234700--Sobic006G190500 Sobic003G094200 Sobic003G094200 Sobic001G424200--Sobic003G094200 Sobic001G424200--Sobic006G231332 Sobic003G300800 Sobic003G300800 Sobic001G424200--Sobic003G300800 Sobic010G178500 Sobic010G178500 Sobic001G424200--Sobic010G178500 Sobic002G294700 Sobic002G294700 Sobic001G424200--Sobic002G294700 Sobic004G249900 Sobic004G249900 Sobic001G424200--Sobic004G249900 Sobic001G424200--Sobic004G048100 Sobic001G424200--Sobic008G177800 Sobic004G036600 Sobic004G036600 Sobic001G424200--Sobic004G036600 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic002G415600--Sobic003G144700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic006G231100 Sobic006G231100 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic002G248100 Sobic002G248100 Sobic010G234600--Sobic002G248100 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic006G231200 Sobic006G231200 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G220200 Sobic010G220200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic001G101500--Sobic010G217800 Sobic001G101500--Sobic010G220200 Sobic001G101500--Sobic008G177800 Sobic001G101500--Sobic002G415600 Sobic009G255500 Sobic009G255500 Sobic001G101500--Sobic009G255500 Sobic001G101500--Sobic010G234600 Sobic001G101500--Sobic004G036600 Sobic001G101500--Sobic010G234700 Sobic001G101500--Sobic002G294700 Sobic006G231332--Sobic010G234600 Sobic006G231332--Sobic002G415600 Sobic006G231332--Sobic006G231100 Sobic006G231332--Sobic006G231200 Sobic006G231332--Sobic008G177800 Sobic006G231332--Sobic010G217800 Sobic009G111200 Sobic009G111200 Sobic006G231332--Sobic009G111200 Sobic006G231332--Sobic006G230900 Sobic006G231332--Sobic001G424200 Sobic004G333900 Sobic004G333900 Sobic008G074900--Sobic004G333900 Sobic008G074900--Sobic006G231332 Sobic008G074900--Sobic009G111200 Sobic008G074900--Sobic008G177800 Sobic008G074900--Sobic002G415600 Sobic005G010200 Sobic005G010200 Sobic008G074900--Sobic005G010200 Sobic008G074900--Sobic010G220200 Sobic005G103500 Sobic005G103500 Sobic008G074900--Sobic005G103500 Sobic009G066800 Sobic009G066800 Sobic008G074900--Sobic009G066800 Sobic004G199300--Sobic010G234700 Sobic004G199300--Sobic002G415600 Sobic004G199300--Sobic003G123600 Sobic004G199300--Sobic010G234600 Sobic006G230800 Sobic006G230800 Sobic004G199300--Sobic006G230800 Sobic001G107800 Sobic001G107800 Sobic004G199300--Sobic001G107800 Sobic009G169000 Sobic009G169000 Sobic004G199300--Sobic009G169000 Sobic005G086400 Sobic005G086400 Sobic004G199300--Sobic005G086400 Sobic004G088300 Sobic004G088300 Sobic004G199300--Sobic004G088300
Octagon: transcription factors


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