Gene annotation
Transcriptome id Sobic.009G247300.2
Synonym ATWRKY28, WRKY28, Sb09g029810
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
WRKY11, expressed
UniProt A0A1Z5R3Z8
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G18170 : WRKY DNA-binding protein 28
RAP-DB (Rice) LOC_Os05g50610.2 : WRKY8, expressed
MaizeGDB (Corn) Zm00025a044587 , Zm00025a029723 , Zm00025a028138 , Zm00025a015639 , Zm00025a038745
Brachypodium KQK04850 , KQK04699 , KQK09077 , KQK21180 , KQK05263 , KQK08818 , KQK08819
Barley HORVU1Hr1G081570.1 , HORVU1Hr1G081570.2 , HORVU1Hr1G081570.4 , HORVU0Hr1G003340.9 , HORVU0Hr1G003340.4 , HORVU0Hr1G003340.6 , HORVU0Hr1G003340.7 , HORVU0Hr1G003340.1 , HORVU0Hr1G003340.2 , HORVU0Hr1G003340.3 , HORVU0Hr1G003340.13 , HORVU0Hr1G003340.10 , HORVU3Hr1G060500.10 , HORVU1Hr1G088300.1 , HORVU1Hr1G088300.2 , HORVU1Hr1G088300.3 , HORVU3Hr1G060500.8 , HORVU3Hr1G060500.9 , HORVU3Hr1G060500.6 , HORVU3Hr1G060500.7 , HORVU3Hr1G060500.4 , HORVU3Hr1G060500.5 , HORVU3Hr1G060500.2 , HORVU3Hr1G060500.3 , HORVU3Hr1G060500.1 , HORVU1Hr1G092130.4 , HORVU1Hr1G092130.5 , HORVU1Hr1G092130.6 , HORVU1Hr1G092130.7 , HORVU1Hr1G092130.1 , HORVU1Hr1G092130.2 , HORVU1Hr1G092130.3 , HORVU2Hr1G046820.1
Wheat TraesCS3B02G270500 , TraesCS1D02G351600 , TraesCS1B02G453300 , TraesCS1B02G453300 , TraesCS1A02G401800 , TraesCS1A02G348600 , TraesCS1D02G429800 , TraesCS3B02G256000 , TraesCS3D02G242500 , TraesCS3A02G228600 , TraesCS1D02G429900 , TraesCS1B02G363200 , TraesCS3A02G242500 , TraesCS1D02G430000 , TraesCS1B02G453200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
2 Sobic.009G066800 - -
3 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
6 Sobic.002G174200 WRKY74, expressed -
7 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
8 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
10 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
12 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
14 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
15 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
16 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
17 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
18 Sobic.006G148000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.002G036150 - -
20 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic009G247300 Sobic009G247300 Sobic002G036100 Sobic002G036100 Sobic009G247300--Sobic002G036100 Sobic009G066800 Sobic009G066800 Sobic009G247300--Sobic009G066800 Sobic004G297200 Sobic004G297200 Sobic009G247300--Sobic004G297200 Sobic001G259600 Sobic001G259600 Sobic009G247300--Sobic001G259600 Sobic001G040200 Sobic001G040200 Sobic009G247300--Sobic001G040200 Sobic002G174200 Sobic002G174200 Sobic009G247300--Sobic002G174200 Sobic006G089300 Sobic006G089300 Sobic009G247300--Sobic006G089300 Sobic010G200700 Sobic010G200700 Sobic009G247300--Sobic010G200700 Sobic004G286600 Sobic004G286600 Sobic009G247300--Sobic004G286600 Sobic001G077400 Sobic001G077400 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic009G066800--Sobic002G036150 Sobic005G010200 Sobic005G010200 Sobic009G066800--Sobic005G010200 Sobic009G066800--Sobic010G200700 Sobic009G066800--Sobic009G247300 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic002G359300 Sobic002G359300 Sobic009G066800--Sobic002G359300 Sobic004G297200--Sobic010G200700 Sobic010G175200 Sobic010G175200 Sobic004G297200--Sobic010G175200 Sobic004G297200--Sobic009G247300 Sobic004G042600 Sobic004G042600 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic003G012800 Sobic003G012800 Sobic004G297200--Sobic003G012800 Sobic003G363200 Sobic003G363200 Sobic004G297200--Sobic003G363200 Sobic004G297200--Sobic009G066800 Sobic009G044400 Sobic009G044400 Sobic004G297200--Sobic009G044400 Sobic001G259700 Sobic001G259700 Sobic001G259600--Sobic001G259700 Sobic001G259600--Sobic003G313800 Sobic010G209100 Sobic010G209100 Sobic001G259600--Sobic010G209100 Sobic002G282300 Sobic002G282300 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic007G213800 Sobic007G213800 Sobic001G259600--Sobic007G213800 Sobic003G324400 Sobic003G324400 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic005G037000 Sobic005G037000 Sobic001G259600--Sobic005G037000 Sobic001G040200--Sobic002G140300 Sobic001G040200--Sobic002G359300 Sobic001G040200--Sobic003G324400 Sobic003G430400 Sobic003G430400 Sobic001G040200--Sobic003G430400 Sobic001G040200--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic001G040200--Sobic009G036100 Sobic003G158500 Sobic003G158500 Sobic001G040200--Sobic003G158500 Sobic006G179500 Sobic006G179500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic002G174200--Sobic001G259600 Sobic009G036000 Sobic009G036000 Sobic002G174200--Sobic009G036000 Sobic001G483400 Sobic001G483400 Sobic002G174200--Sobic001G483400 Sobic002G174200--Sobic001G259700 Sobic002G174200--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic002G174200--Sobic006G190100 Sobic002G405600 Sobic002G405600 Sobic002G174200--Sobic002G405600 Sobic002G291900 Sobic002G291900 Sobic002G174200--Sobic002G291900 Sobic002G174200--Sobic003G313800 Sobic006G089300--Sobic001G040200 Sobic006G089300--Sobic002G359300 Sobic006G089300--Sobic006G179500 Sobic006G228300 Sobic006G228300 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic006G089300--Sobic010G200700 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic010G200700--Sobic009G066800 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic008G177800 Sobic008G177800 Sobic004G286600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G286600--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic004G286600--Sobic002G294700 Sobic001G077700 Sobic001G077700 Sobic004G286600--Sobic001G077700 Sobic010G234600 Sobic010G234600 Sobic004G286600--Sobic010G234600 Sobic004G286600--Sobic002G036100 Sobic002G248100 Sobic002G248100 Sobic004G286600--Sobic002G248100 Sobic004G286600--Sobic006G179500 Sobic004G286600--Sobic002G140300
Octagon: transcription factors


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