Gene annotation
Transcriptome id Sobic.002G036150.1
Synonym -
Functional annotation -
UniProt A0A1W0W266
Pfam PF06200
Panther DB PTHR33077 PTHR33077:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30135 : jasmonate-zim-domain protein 8
RAP-DB (Rice) LOC_Os07g05830.1 : zinc-finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a045036
Brachypodium PNT77153
Barley -
Wheat TraesCS2B02G264000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
2 Sobic.009G066800 - -
3 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
4 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
6 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
7 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
8 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
9 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
10 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
11 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
12 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
13 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
14 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
16 Sobic.001G538866 - -
17 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
18 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G074900 - -
20 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase


Gene co-expression network
sample Sobic002G036150 Sobic002G036150 Sobic002G036100 Sobic002G036100 Sobic002G036150--Sobic002G036100 Sobic009G066800 Sobic009G066800 Sobic002G036150--Sobic009G066800 Sobic009G247300 Sobic009G247300 Sobic002G036150--Sobic009G247300 Sobic005G010200 Sobic005G010200 Sobic002G036150--Sobic005G010200 Sobic002G359300 Sobic002G359300 Sobic002G036150--Sobic002G359300 Sobic003G158500 Sobic003G158500 Sobic002G036150--Sobic003G158500 Sobic009G036100 Sobic009G036100 Sobic002G036150--Sobic009G036100 Sobic001G040200 Sobic001G040200 Sobic002G036150--Sobic001G040200 Sobic008G177800 Sobic008G177800 Sobic002G036150--Sobic008G177800 Sobic001G077400 Sobic001G077400 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic009G066800--Sobic002G036150 Sobic009G066800--Sobic005G010200 Sobic010G200700 Sobic010G200700 Sobic009G066800--Sobic010G200700 Sobic009G066800--Sobic009G247300 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic006G089300 Sobic006G089300 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic009G066800--Sobic002G359300 Sobic009G247300--Sobic002G036100 Sobic009G247300--Sobic009G066800 Sobic004G297200 Sobic004G297200 Sobic009G247300--Sobic004G297200 Sobic009G247300--Sobic001G259600 Sobic009G247300--Sobic001G040200 Sobic002G174200 Sobic002G174200 Sobic009G247300--Sobic002G174200 Sobic009G247300--Sobic006G089300 Sobic009G247300--Sobic010G200700 Sobic004G286600 Sobic004G286600 Sobic009G247300--Sobic004G286600 Sobic010G220200 Sobic010G220200 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic006G190500 Sobic006G190500 Sobic005G010200--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic005G010200--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic005G010200--Sobic002G415600 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic002G359300--Sobic001G040200 Sobic006G179500 Sobic006G179500 Sobic002G359300--Sobic006G179500 Sobic002G359300--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G359300--Sobic006G183400 Sobic002G195900 Sobic002G195900 Sobic002G359300--Sobic002G195900 Sobic003G430400 Sobic003G430400 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic002G359300--Sobic006G089300 Sobic009G183300 Sobic009G183300 Sobic002G359300--Sobic009G183300 Sobic003G158500--Sobic001G040200 Sobic003G158500--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic003G158500--Sobic002G245100 Sobic010G259300 Sobic010G259300 Sobic003G158500--Sobic010G259300 Sobic001G407800 Sobic001G407800 Sobic003G158500--Sobic001G407800 Sobic002G356101 Sobic002G356101 Sobic003G158500--Sobic002G356101 Sobic007G151100 Sobic007G151100 Sobic003G158500--Sobic007G151100 Sobic003G158500--Sobic003G430400 Sobic003G158500--Sobic001G538866 Sobic009G036000 Sobic009G036000 Sobic009G036100--Sobic009G036000 Sobic007G074000 Sobic007G074000 Sobic009G036100--Sobic007G074000 Sobic001G320900 Sobic001G320900 Sobic009G036100--Sobic001G320900 Sobic009G036100--Sobic001G407800 Sobic009G247900 Sobic009G247900 Sobic009G036100--Sobic009G247900 Sobic009G036100--Sobic002G140300 Sobic003G369100 Sobic003G369100 Sobic009G036100--Sobic003G369100 Sobic003G324400 Sobic003G324400 Sobic009G036100--Sobic003G324400 Sobic001G258300 Sobic001G258300 Sobic009G036100--Sobic001G258300 Sobic001G040200--Sobic002G140300 Sobic001G040200--Sobic002G359300 Sobic001G040200--Sobic003G324400 Sobic001G040200--Sobic003G430400 Sobic001G040200--Sobic001G538866 Sobic001G040200--Sobic009G036100 Sobic001G040200--Sobic003G158500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic002G294700 Sobic002G294700 Sobic008G177800--Sobic002G294700 Sobic006G231100 Sobic006G231100 Sobic008G177800--Sobic006G231100 Sobic010G234600 Sobic010G234600 Sobic008G177800--Sobic010G234600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic006G230900 Sobic006G230900 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.