Gene annotation
Transcriptome id Sobic.010G200700.2,Sobic.010G200700.1
Synonym Sb10g024890
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0VTY2 , A0A194YKC4
Pfam -
Panther DB PTHR33709 PTHR33709:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16860 : Ubiquitin-specific protease family C19-related protein
RAP-DB (Rice) LOC_Os06g43020.1 : expressed protein
MaizeGDB (Corn) Zm00025a051443
Brachypodium KQK17564 , KQK17565 , PNT75591 , PNT75587 , PNT75586 , PNT75589 , PNT75588 , PNT75583 , PNT75585 , PNT75584 , PNT75590
Barley HORVU0Hr1G022000.3 , HORVU0Hr1G022000.6 , HORVU0Hr1G022000.9
Wheat TraesCS7D02G384800 , TraesCS7A02G388900 , TraesCS7A02G388900 , TraesCS7B02G290800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
2 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
3 Sobic.003G012800 AP2 domain containing protein, expressed -
4 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
5 Sobic.003G373000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.009G066800 - -
7 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
8 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
10 Sobic.004G042600 protein kinase domain containing protein, expressed -
11 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
12 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
14 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
15 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
16 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
18 Sobic.001G290400 no apical meristem protein, putative, expressed -
19 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
20 Sobic.003G082000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic010G200700 Sobic010G200700 Sobic004G297200 Sobic004G297200 Sobic010G200700--Sobic004G297200 Sobic006G089300 Sobic006G089300 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic006G228300 Sobic006G228300 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic009G066800 Sobic009G066800 Sobic010G200700--Sobic009G066800 Sobic002G036100 Sobic002G036100 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic004G297200--Sobic010G200700 Sobic010G175200 Sobic010G175200 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G042600 Sobic004G042600 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic004G297200--Sobic003G012800 Sobic003G363200 Sobic003G363200 Sobic004G297200--Sobic003G363200 Sobic004G297200--Sobic009G066800 Sobic009G044400 Sobic009G044400 Sobic004G297200--Sobic009G044400 Sobic001G040200 Sobic001G040200 Sobic006G089300--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G089300--Sobic002G359300 Sobic006G179500 Sobic006G179500 Sobic006G089300--Sobic006G179500 Sobic006G089300--Sobic006G228300 Sobic001G538866 Sobic001G538866 Sobic006G089300--Sobic001G538866 Sobic002G140300 Sobic002G140300 Sobic006G089300--Sobic002G140300 Sobic006G089300--Sobic010G200700 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic003G012800--Sobic010G200700 Sobic003G012800--Sobic003G268700 Sobic003G012800--Sobic003G373000 Sobic003G012800--Sobic006G089300 Sobic003G012800--Sobic006G228300 Sobic001G209800 Sobic001G209800 Sobic003G012800--Sobic001G209800 Sobic001G077400 Sobic001G077400 Sobic003G012800--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic003G012800--Sobic009G217600 Sobic003G012800--Sobic002G036100 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G228300--Sobic006G179500 Sobic006G228300--Sobic001G040200 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic006G228300--Sobic002G131800 Sobic001G341600 Sobic001G341600 Sobic006G228300--Sobic001G341600 Sobic003G373000--Sobic010G200700 Sobic003G373000--Sobic003G012800 Sobic003G373000--Sobic002G036100 Sobic004G286600 Sobic004G286600 Sobic003G373000--Sobic004G286600 Sobic003G373000--Sobic010G245800 Sobic003G373000--Sobic006G089300 Sobic003G373000--Sobic009G066800 Sobic001G513700 Sobic001G513700 Sobic003G373000--Sobic001G513700 Sobic003G373000--Sobic001G077400 Sobic002G036150 Sobic002G036150 Sobic009G066800--Sobic002G036150 Sobic005G010200 Sobic005G010200 Sobic009G066800--Sobic005G010200 Sobic009G066800--Sobic010G200700 Sobic009G066800--Sobic009G247300 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic009G066800--Sobic002G359300 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic010G246000 Sobic010G246000 Sobic010G245800--Sobic010G246000 Sobic010G245800--Sobic010G200700 Sobic005G139700 Sobic005G139700 Sobic010G245800--Sobic005G139700 Sobic009G071800 Sobic009G071800 Sobic010G245800--Sobic009G071800 Sobic002G294700 Sobic002G294700 Sobic010G245800--Sobic002G294700 Sobic010G234600 Sobic010G234600 Sobic010G245800--Sobic010G234600 Sobic001G051800 Sobic001G051800 Sobic010G245800--Sobic001G051800 Sobic003G019200 Sobic003G019200 Sobic010G245800--Sobic003G019200 Sobic002G248100 Sobic002G248100 Sobic010G245800--Sobic002G248100 Sobic001G441100 Sobic001G441100 Sobic002G131800--Sobic001G441100 Sobic006G066200 Sobic006G066200 Sobic002G131800--Sobic006G066200 Sobic002G131800--Sobic002G140300 Sobic002G131800--Sobic006G179500 Sobic002G131800--Sobic009G217600 Sobic002G131800--Sobic001G341600 Sobic002G131800--Sobic001G077400 Sobic001G035000 Sobic001G035000 Sobic002G131800--Sobic001G035000 Sobic002G131800--Sobic006G165100
Octagon: transcription factors


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