Gene annotation
Transcriptome id Sobic.003G373000.1
Synonym Sb03g041360, MYB6, AtMYB6
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XRB4
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF617
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09460 : myb domain protein 6
RAP-DB (Rice) LOC_Os01g65370.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a014898 , Zm00025a055223 , Zm00025a020983 , Zm00025a012794 , Zm00025a053274 , Zm00025a014457 , Zm00025a009985 , Zm00025a009981 , Zm00025a038916 , Zm00025a026626 , Zm00025a032132 , Zm00025a037328 , Zm00025a034021 , Zm00025a034217 , Zm00025a048371 , Zm00025a053397 , Zm00025a047793 , Zm00025a025444 , Zm00025a050283 , Zm00025a039543 , Zm00025a041179 , Zm00025a041887 , Zm00025a032383 , Zm00025a020817 , Zm00025a017369 , Zm00025a043868 , Zm00025a029124 , Zm00025a018024 , Zm00025a049338 , Zm00025a007095 , Zm00025a005685 , Zm00025a000572 , Zm00025a010442 , Zm00025a004179 , Zm00025a025715 , Zm00025a011116 , Zm00025a056908 , Zm00025a056901
Brachypodium KQK15782 , PNT69079 , KQJ84327 , KQK00034 , KQK09332 , PNT74485 , PNT74484 , KQK07949 , PNT65032 , KQJ82982 , KQJ99288 , KQK14343 , KQJ92025 , KQK09372 , KQJ98746 , KQJ89177 , KQK02877 , KQK00366 , KQJ87229 , KQJ83761 , KQK20023 , KQK20025 , KQK20024 , KQK06100 , KQK20026 , PNT76712 , PNT76711 , KQK10836 , KQJ89311 , KQK08236 , KQK00512 , KQJ84313 , KQK19995 , KQJ91235 , PNT76695 , KQK23714 , KQJ83493
Barley HORVU7Hr1G072450.3 , HORVU7Hr1G072450.2 , HORVU4Hr1G049630.2 , HORVU4Hr1G049630.1 , HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU7Hr1G003490.2 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU3Hr1G082210.8 , HORVU3Hr1G082210.9 , HORVU3Hr1G082210.2 , HORVU3Hr1G082210.3 , HORVU3Hr1G082210.1 , HORVU3Hr1G082210.6 , HORVU3Hr1G082210.7 , HORVU3Hr1G082210.4 , HORVU3Hr1G082210.5 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.5 , HORVU6Hr1G060650.4 , HORVU6Hr1G060650.3 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.2 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.6 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.8 , HORVU7Hr1G057410.8 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU2Hr1G087990.2 , HORVU2Hr1G087990.1 , HORVU3Hr1G016940.1
Wheat TraesCS1D02G371900 , TraesCS2B02G343800 , TraesCS2D02G445900 , TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS2D02G446100 , TraesCS2B02G467900 , TraesCS3D02G255400 , TraesCS2D02G209600 , TraesCS2D02G444200 , TraesCS2D02G446000 , TraesCS6D02G207300 , TraesCS2D02G446500 , TraesCS5B02G330100 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS2B02G467700 , TraesCS1D02G371800 , TraesCS2A02G363800 , TraesCS1A02G268800 , TraesCS2A02G206400 , TraesCS2A02G552400 , TraesCS3B02G290600 , TraesCS3B02G109800 , TraesCS4B02G344000 , TraesCS7A02G030600 , TraesCS1D02G371600 , TraesCS2D02G446400 , TraesCS3A02G257800 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS1A02G366000 , TraesCS4A02G172200 , TraesCS5D02G335700 , TraesCS2B02G583800 , TraesCS2A02G447600 , TraesCS5A02G512700 , TraesCS2B02G387000 , TraesCS3B02G286500 , TraesCS1A02G366200 , TraesCSU02G069000 , TraesCS1B02G383700 , TraesCS5A02G111300 , TraesCS5A02G329900 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS2B02G468000 , TraesCS1D02G371400 , TraesCS7B02G031000 , TraesCS2A02G447300 , TraesCS7A02G030800 , TraesCS3D02G094500 , TraesCS7A02G030700 , TraesCS3A02G384400 , TraesCS1B02G279400 , TraesCS4A02G217800 , TraesCS6B02G254200 , TraesCS2A02G447400 , TraesCS6D02G219500 , TraesCS6B02G265400 , TraesCS6A02G227700 , TraesCS7D02G026900 , TraesCS1B02G383800 , TraesCS7A02G130700 , TraesCS4D02G142900 , TraesCS4D02G092900 , TraesCS1D02G268900 , TraesCS3D02G377300 , TraesCS5B02G119300 , TraesCS2D02G361600 , TraesCS2B02G467800 , TraesCS2D02G366400 , TraesCS3D02G257800 , TraesCS6A02G236900 , TraesCS2A02G370000 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS3B02G416400 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS2D02G324800 , TraesCS2A02G338200 , TraesCS7D02G130100 , TraesCS4B02G096500 , TraesCS2A02G447100 , TraesCS1A02G366300
Populus PNT39349


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G012800 AP2 domain containing protein, expressed -
3 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
4 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
5 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
7 Sobic.009G066800 - -
8 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
9 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
10 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
12 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
14 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
15 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
16 Sobic.008G151300 expressed protein -
17 Sobic.002G248100 expressed protein -
18 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
19 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
20 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -


Gene co-expression network
sample Sobic003G373000 Sobic003G373000 Sobic010G200700 Sobic010G200700 Sobic003G373000--Sobic010G200700 Sobic003G012800 Sobic003G012800 Sobic003G373000--Sobic003G012800 Sobic002G036100 Sobic002G036100 Sobic003G373000--Sobic002G036100 Sobic004G286600 Sobic004G286600 Sobic003G373000--Sobic004G286600 Sobic010G245800 Sobic010G245800 Sobic003G373000--Sobic010G245800 Sobic006G089300 Sobic006G089300 Sobic003G373000--Sobic006G089300 Sobic009G066800 Sobic009G066800 Sobic003G373000--Sobic009G066800 Sobic001G513700 Sobic001G513700 Sobic003G373000--Sobic001G513700 Sobic001G077400 Sobic001G077400 Sobic003G373000--Sobic001G077400 Sobic004G297200 Sobic004G297200 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic010G200700--Sobic003G012800 Sobic006G228300 Sobic006G228300 Sobic010G200700--Sobic006G228300 Sobic010G200700--Sobic003G373000 Sobic010G200700--Sobic009G066800 Sobic010G200700--Sobic002G036100 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic003G012800--Sobic010G200700 Sobic003G268700 Sobic003G268700 Sobic003G012800--Sobic003G268700 Sobic003G012800--Sobic003G373000 Sobic003G012800--Sobic006G089300 Sobic003G012800--Sobic006G228300 Sobic001G209800 Sobic001G209800 Sobic003G012800--Sobic001G209800 Sobic003G012800--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic003G012800--Sobic009G217600 Sobic003G012800--Sobic002G036100 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200 Sobic008G177800 Sobic008G177800 Sobic004G286600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G286600--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic004G286600--Sobic002G294700 Sobic001G077700 Sobic001G077700 Sobic004G286600--Sobic001G077700 Sobic010G234600 Sobic010G234600 Sobic004G286600--Sobic010G234600 Sobic004G286600--Sobic002G036100 Sobic002G248100 Sobic002G248100 Sobic004G286600--Sobic002G248100 Sobic006G179500 Sobic006G179500 Sobic004G286600--Sobic006G179500 Sobic004G286600--Sobic002G140300 Sobic010G246000 Sobic010G246000 Sobic010G245800--Sobic010G246000 Sobic010G245800--Sobic010G200700 Sobic005G139700 Sobic005G139700 Sobic010G245800--Sobic005G139700 Sobic009G071800 Sobic009G071800 Sobic010G245800--Sobic009G071800 Sobic010G245800--Sobic002G294700 Sobic010G245800--Sobic010G234600 Sobic001G051800 Sobic001G051800 Sobic010G245800--Sobic001G051800 Sobic003G019200 Sobic003G019200 Sobic010G245800--Sobic003G019200 Sobic010G245800--Sobic002G248100 Sobic006G089300--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G089300--Sobic002G359300 Sobic006G089300--Sobic006G179500 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic006G089300--Sobic010G200700 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic009G066800--Sobic002G036150 Sobic005G010200 Sobic005G010200 Sobic009G066800--Sobic005G010200 Sobic009G066800--Sobic010G200700 Sobic009G247300 Sobic009G247300 Sobic009G066800--Sobic009G247300 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic009G066800--Sobic002G359300 Sobic001G513700--Sobic008G177800 Sobic001G513700--Sobic007G151100 Sobic001G513700--Sobic002G036100 Sobic001G516600 Sobic001G516600 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic001G513700--Sobic006G231100 Sobic001G513700--Sobic002G294700 Sobic007G057100 Sobic007G057100 Sobic001G513700--Sobic007G057100 Sobic001G513700--Sobic006G089300 Sobic001G077400--Sobic004G280900 Sobic005G037000 Sobic005G037000 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic001G077400--Sobic006G165100 Sobic001G341600 Sobic001G341600 Sobic001G077400--Sobic001G341600
Octagon: transcription factors


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