Gene annotation
Transcriptome id Sobic.004G042600.1
Synonym Sb04g003680
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A194YMS1
Pfam PF13855 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF20
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os02g05730.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019005
Brachypodium KQJ93359
Barley HORVU6Hr1G022310.13 , HORVU6Hr1G022310.11 , HORVU6Hr1G022310.16 , HORVU6Hr1G022310.17 , HORVU6Hr1G022310.14 , HORVU6Hr1G022360.1 , HORVU6Hr1G022360.3 , HORVU6Hr1G022360.2 , HORVU6Hr1G022360.5 , HORVU6Hr1G022360.4 , HORVU6Hr1G022360.7 , HORVU6Hr1G022360.6 , HORVU6Hr1G022360.9 , HORVU6Hr1G022360.8 , HORVU6Hr1G022360.20 , HORVU6Hr1G022360.21 , HORVU6Hr1G022360.22 , HORVU6Hr1G022360.23 , HORVU6Hr1G022360.24 , HORVU6Hr1G022360.25 , HORVU6Hr1G022360.26 , HORVU6Hr1G022360.27 , HORVU6Hr1G022360.28 , HORVU6Hr1G022360.29 , HORVU6Hr1G022310.18 , HORVU6Hr1G022310.12 , HORVU6Hr1G022310.10 , HORVU6Hr1G022310.15 , HORVU6Hr1G022310.19 , HORVU6Hr1G022360.32 , HORVU6Hr1G022360.31 , HORVU6Hr1G022360.30 , HORVU6Hr1G022360.15 , HORVU6Hr1G022360.14 , HORVU6Hr1G022360.17 , HORVU6Hr1G022360.16 , HORVU6Hr1G022360.11 , HORVU6Hr1G022360.10 , HORVU6Hr1G022360.13 , HORVU6Hr1G022360.12 , HORVU6Hr1G022360.19 , HORVU6Hr1G022360.18 , HORVU6Hr1G022310.8 , HORVU6Hr1G022310.9 , HORVU6Hr1G022310.1 , HORVU6Hr1G022310.2 , HORVU6Hr1G022310.3 , HORVU6Hr1G022310.4 , HORVU6Hr1G022310.5 , HORVU6Hr1G022310.6 , HORVU6Hr1G022310.7
Wheat TraesCS6B02G150200 , TraesCS6A02G122000 , TraesCS6B02G150400 , TraesCS6A02G122200 , TraesCS6A02G122200 , TraesCS6A02G122200 , TraesCS6D02G112200 , TraesCS6D02G112000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
3 Sobic.002G080000 - -
4 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
5 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
6 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
7 Sobic.002G219200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@plant viral response family protein, putative, expressed -
8 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
9 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
10 Sobic.001G189700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
11 Sobic.003G082000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
12 Sobic.003G012800 AP2 domain containing protein, expressed -
13 Sobic.006G169000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
14 Sobic.003G035700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
16 Sobic.001G474200 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
17 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
18 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G263100 expressed protein -
20 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -


Gene co-expression network
sample Sobic004G042600 Sobic004G042600 Sobic010G200700 Sobic010G200700 Sobic004G042600--Sobic010G200700 Sobic004G297200 Sobic004G297200 Sobic004G042600--Sobic004G297200 Sobic002G080000 Sobic002G080000 Sobic004G042600--Sobic002G080000 Sobic010G175200 Sobic010G175200 Sobic004G042600--Sobic010G175200 Sobic006G228300 Sobic006G228300 Sobic004G042600--Sobic006G228300 Sobic003G363200 Sobic003G363200 Sobic004G042600--Sobic003G363200 Sobic002G219200 Sobic002G219200 Sobic004G042600--Sobic002G219200 Sobic006G078400 Sobic006G078400 Sobic004G042600--Sobic006G078400 Sobic003G429300 Sobic003G429300 Sobic004G042600--Sobic003G429300 Sobic010G200700--Sobic004G297200 Sobic006G089300 Sobic006G089300 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic009G066800 Sobic009G066800 Sobic010G200700--Sobic009G066800 Sobic002G036100 Sobic002G036100 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic004G297200--Sobic010G200700 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic004G297200--Sobic003G012800 Sobic004G297200--Sobic003G363200 Sobic004G297200--Sobic009G066800 Sobic009G044400 Sobic009G044400 Sobic004G297200--Sobic009G044400 Sobic001G189700 Sobic001G189700 Sobic002G080000--Sobic001G189700 Sobic002G080000--Sobic004G042600 Sobic002G080000--Sobic010G200700 Sobic002G080000--Sobic003G012800 Sobic004G280800 Sobic004G280800 Sobic002G080000--Sobic004G280800 Sobic002G080000--Sobic004G297200 Sobic002G080000--Sobic006G228300 Sobic004G053200 Sobic004G053200 Sobic002G080000--Sobic004G053200 Sobic009G184400 Sobic009G184400 Sobic002G080000--Sobic009G184400 Sobic010G175200--Sobic004G297200 Sobic010G175200--Sobic004G042600 Sobic010G175200--Sobic006G078400 Sobic010G175200--Sobic009G044400 Sobic003G341100 Sobic003G341100 Sobic010G175200--Sobic003G341100 Sobic010G175200--Sobic010G200700 Sobic010G175200--Sobic003G363200 Sobic003G158600 Sobic003G158600 Sobic010G175200--Sobic003G158600 Sobic010G078600 Sobic010G078600 Sobic010G175200--Sobic010G078600 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G179500 Sobic006G179500 Sobic006G228300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic006G228300--Sobic001G040200 Sobic001G538866 Sobic001G538866 Sobic006G228300--Sobic001G538866 Sobic002G140300 Sobic002G140300 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic006G228300--Sobic002G131800 Sobic001G341600 Sobic001G341600 Sobic006G228300--Sobic001G341600 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic001G290400 Sobic001G290400 Sobic003G363200--Sobic001G290400 Sobic003G363200--Sobic004G297200 Sobic003G363200--Sobic006G078400 Sobic003G363200--Sobic010G245800 Sobic009G057400 Sobic009G057400 Sobic002G219200--Sobic009G057400 Sobic002G219200--Sobic003G363200 Sobic002G219200--Sobic010G200700 Sobic001G035000 Sobic001G035000 Sobic002G219200--Sobic001G035000 Sobic002G219200--Sobic004G042600 Sobic006G267000 Sobic006G267000 Sobic002G219200--Sobic006G267000 Sobic006G274300 Sobic006G274300 Sobic002G219200--Sobic006G274300 Sobic003G082000 Sobic003G082000 Sobic002G219200--Sobic003G082000 Sobic002G219200--Sobic010G245800 Sobic006G078400--Sobic009G044400 Sobic006G078400--Sobic003G429300 Sobic006G078400--Sobic003G363200 Sobic006G078400--Sobic001G290400 Sobic002G118600 Sobic002G118600 Sobic006G078400--Sobic002G118600 Sobic006G078400--Sobic010G175200 Sobic006G078400--Sobic001G341600 Sobic001G147200 Sobic001G147200 Sobic006G078400--Sobic001G147200 Sobic006G078400--Sobic006G228300 Sobic007G171000 Sobic007G171000 Sobic003G429300--Sobic007G171000 Sobic003G429300--Sobic006G179500 Sobic008G111100 Sobic008G111100 Sobic003G429300--Sobic008G111100 Sobic002G224100 Sobic002G224100 Sobic003G429300--Sobic002G224100 Sobic003G019200 Sobic003G019200 Sobic003G429300--Sobic003G019200 Sobic002G195900 Sobic002G195900 Sobic003G429300--Sobic002G195900 Sobic003G429300--Sobic006G228300 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300
Octagon: transcription factors


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