Gene annotation
Transcriptome id Sobic.006G078400.1
Synonym Sb06g016530
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
abscisic stress-ripening, putative, expressed
UniProt C5YGE1
Pfam PF02496
Panther DB PTHR33801 PTHR33801:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g72900.1 : abscisic stress-ripening, putative, expressed
MaizeGDB (Corn) Zm00025a056039 , Zm00025a054008
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G078400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
2 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
3 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
4 Sobic.001G290400 no apical meristem protein, putative, expressed -
5 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
6 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
7 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
9 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
10 Sobic.002G379866 - -
11 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
12 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
13 Sobic.002G222800 galactosyltransferase, putative, expressed -
14 Sobic.004G042600 protein kinase domain containing protein, expressed -
15 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
16 Sobic.001G189700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
17 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -
19 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
20 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic006G078400 Sobic006G078400 Sobic009G044400 Sobic009G044400 Sobic006G078400--Sobic009G044400 Sobic003G429300 Sobic003G429300 Sobic006G078400--Sobic003G429300 Sobic003G363200 Sobic003G363200 Sobic006G078400--Sobic003G363200 Sobic001G290400 Sobic001G290400 Sobic006G078400--Sobic001G290400 Sobic002G118600 Sobic002G118600 Sobic006G078400--Sobic002G118600 Sobic010G175200 Sobic010G175200 Sobic006G078400--Sobic010G175200 Sobic001G341600 Sobic001G341600 Sobic006G078400--Sobic001G341600 Sobic001G147200 Sobic001G147200 Sobic006G078400--Sobic001G147200 Sobic006G228300 Sobic006G228300 Sobic006G078400--Sobic006G228300 Sobic003G341100 Sobic003G341100 Sobic009G044400--Sobic003G341100 Sobic009G044400--Sobic006G078400 Sobic009G217500 Sobic009G217500 Sobic009G044400--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic009G044400--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic009G044400--Sobic006G273800 Sobic009G044400--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G044400--Sobic001G035000 Sobic003G361100 Sobic003G361100 Sobic009G044400--Sobic003G361100 Sobic001G192800 Sobic001G192800 Sobic009G044400--Sobic001G192800 Sobic007G171000 Sobic007G171000 Sobic003G429300--Sobic007G171000 Sobic006G179500 Sobic006G179500 Sobic003G429300--Sobic006G179500 Sobic008G111100 Sobic008G111100 Sobic003G429300--Sobic008G111100 Sobic002G224100 Sobic002G224100 Sobic003G429300--Sobic002G224100 Sobic003G019200 Sobic003G019200 Sobic003G429300--Sobic003G019200 Sobic002G195900 Sobic002G195900 Sobic003G429300--Sobic002G195900 Sobic003G429300--Sobic006G228300 Sobic010G200700 Sobic010G200700 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic001G290400--Sobic002G118600 Sobic002G294700 Sobic002G294700 Sobic001G290400--Sobic002G294700 Sobic001G051800 Sobic001G051800 Sobic001G290400--Sobic001G051800 Sobic004G053200 Sobic004G053200 Sobic001G290400--Sobic004G053200 Sobic003G338900 Sobic003G338900 Sobic001G290400--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic001G290400--Sobic001G473900 Sobic010G228000 Sobic010G228000 Sobic001G290400--Sobic010G228000 Sobic001G290400--Sobic005G139700 Sobic001G538866 Sobic001G538866 Sobic001G290400--Sobic001G538866 Sobic002G118600--Sobic001G147200 Sobic002G118600--Sobic001G341600 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G374100 Sobic002G374100 Sobic002G118600--Sobic002G374100 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic002G118600--Sobic001G538866 Sobic002G118600--Sobic006G228300 Sobic010G175200--Sobic004G297200 Sobic004G042600 Sobic004G042600 Sobic010G175200--Sobic004G042600 Sobic010G175200--Sobic006G078400 Sobic010G175200--Sobic009G044400 Sobic010G175200--Sobic003G341100 Sobic010G175200--Sobic010G200700 Sobic010G175200--Sobic003G363200 Sobic003G158600 Sobic003G158600 Sobic010G175200--Sobic003G158600 Sobic010G078600 Sobic010G078600 Sobic010G175200--Sobic010G078600 Sobic009G217600 Sobic009G217600 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G341600--Sobic001G538866 Sobic001G147200--Sobic003G019200 Sobic010G246000 Sobic010G246000 Sobic001G147200--Sobic010G246000 Sobic001G147200--Sobic002G118600 Sobic010G204300 Sobic010G204300 Sobic001G147200--Sobic010G204300 Sobic001G147200--Sobic006G228300 Sobic001G399100 Sobic001G399100 Sobic001G147200--Sobic001G399100 Sobic001G147200--Sobic001G538866 Sobic001G147200--Sobic002G374100 Sobic006G263100 Sobic006G263100 Sobic001G147200--Sobic006G263100 Sobic006G089300 Sobic006G089300 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G228300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic006G228300--Sobic001G040200 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic002G131800 Sobic002G131800 Sobic006G228300--Sobic002G131800 Sobic006G228300--Sobic001G341600
Octagon: transcription factors


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